RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LCNL1Q6ZST4 164 aa18.84■□□□□ 0.61
USP47-205ENST00000525257 CNIH3Q8TBE1 160 aa18.84■□□□□ 0.61
USP47-205ENST00000525257 PELI1Q96FA3 418 aa18.84■□□□□ 0.61
USP47-205ENST00000525257 BARHL1Q9BZE3 327 aa18.84■□□□□ 0.61
USP47-205ENST00000525257 LINC00574Q9H8X3 128 aa18.84■□□□□ 0.61
USP47-205ENST00000525257 TRAV39A0A0B4J263 110 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 NPIPB11E5RHQ5 1161 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 J3QRE1 110 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 SSTR5P35346 364 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 GP2P55259 537 aaKnown RBP18.83■□□□□ 0.6
USP47-205ENST00000525257 NKAPLQ5M9Q1 402 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 ZNF691Q5VV52 312 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 TEX38Q6PEX7 206 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 PLPPR1Q8TBJ4 325 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 C4orf36Q96KX1 117 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 NCOR1P1Q9H4R4 102 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 DCLRE1BQ9H816 532 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 IMPAD1Q9NX62 359 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 LSM4Q9Y4Z0 139 aaKnown RBP18.83■□□□□ 0.6
USP47-205ENST00000525257 AP4S1Q9Y587 144 aa18.83■□□□□ 0.6
USP47-205ENST00000525257 IGHV3-72A0A0B4J1Y9 119 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 NCBP2LA6PVI3 153 aaKnown RBP18.82■□□□□ 0.6
USP47-205ENST00000525257 HSD17B6O14756 317 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 SULT1B1O43704 296 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 REG1BP48304 166 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 ALKBH1Q13686 389 aaKnown RBP18.82■□□□□ 0.6
USP47-205ENST00000525257 RSBN1Q5VWQ0 802 aaPredicted RBP18.82■□□□□ 0.6
USP47-205ENST00000525257 MOB3BQ86TA1 216 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 OAZ3Q9UMX2 235 aa18.82■□□□□ 0.6
USP47-205ENST00000525257 DYNC2H1Q8NCM8 4307 aaKnown RBP18.81■□□□□ 0.6
USP47-205ENST00000525257 AP4M1O00189 453 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 GPR12P47775 334 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 ELP2Q6IA86 826 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 OR5D14Q8NGL3 314 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 OR5M8Q8NGP6 311 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 OR8U1Q8NH10 309 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 EAF1Q96JC9 268 aaPredicted RBP18.81■□□□□ 0.6
USP47-205ENST00000525257 ASCL2Q99929 193 aa18.81■□□□□ 0.6
USP47-205ENST00000525257 IGHV1-3A0A0C4DH29 117 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 CCRL2O00421 344 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 ZNF816Q0VGE8 651 aaPredicted RBP18.8■□□□□ 0.6
USP47-205ENST00000525257 EBI3Q14213 229 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 PNLIPRP3Q17RR3 467 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 PIGYQ3MUY2 71 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 CXorf66Q5JRM2 361 aaPredicted RBP18.8■□□□□ 0.6
USP47-205ENST00000525257 C9orf66Q5T8R8 295 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 TGIF2LXQ8IUE1 241 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 SERPINA12Q8IW75 414 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 OR10K1Q8NGX5 313 aa18.8■□□□□ 0.6
USP47-205ENST00000525257 HUWE1Q7Z6Z7 4374 aaKnown RBP18.79■□□□□ 0.6
USP47-205ENST00000525257 SAC3D1A6NKF1 404 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 GAPDHP04406 335 aaKnown RBP18.79■□□□□ 0.6
USP47-205ENST00000525257 FCGR1AP12314 374 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 ECI1P42126 302 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 GPR50Q13585 617 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 IL13RA2Q14627 380 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 SLC16A12Q6ZSM3 486 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 ACBD7Q8N6N7 88 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 PXT1Q8NFP0 134 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 OR10A7Q8NGE5 316 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 TNFAIP8L1Q8WVP5 186 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 TRUB1Q8WWH5 349 aaKnown RBP18.79■□□□□ 0.6
USP47-205ENST00000525257 ABCG5Q9H222 651 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 LIN7CQ9NUP9 197 aaKnown RBP18.79■□□□□ 0.6
USP47-205ENST00000525257 ZNF581Q9P0T4 197 aa18.79■□□□□ 0.6
USP47-205ENST00000525257 DNAH7Q8WXX0 4024 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 SEC14L6B5MCN3 397 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 GABRPO00591 440 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 PAX5Q02548 391 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 KIR2DS1Q14954 304 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 SATL1Q86VE3 508 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 IZUMO1Q8IYV9 350 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 PARP16Q8N5Y8 322 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 Q8N6K4 173 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 Q8N9W7 124 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 TSEN15Q8WW01 171 aaKnown RBP18.78■□□□□ 0.6
USP47-205ENST00000525257 GPER1Q99527 375 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 GON7Q9BXV9 100 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 FAM192AQ9GZU8 254 aa18.78■□□□□ 0.6
USP47-205ENST00000525257 KCNJ3P48549 501 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 FOXE3Q13461 319 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 RSU1Q15404 277 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 OR2T10Q8NGZ9 312 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 UBALD1Q8TB05 177 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 ALG8Q9BVK2 526 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 DPCDQ9BVM2 203 aaPredicted RBP18.77■□□□□ 0.6
USP47-205ENST00000525257 ISG20L2Q9H9L3 353 aaKnown RBP18.77■□□□□ 0.6
USP47-205ENST00000525257 FAM118AQ9NWS6 357 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 DHDHQ9UQ10 334 aa18.77■□□□□ 0.6
USP47-205ENST00000525257 MPZL2O60487 215 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 ZFPL1O95159 310 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 CDX1P47902 265 aaPredicted RBP18.76■□□□□ 0.59
USP47-205ENST00000525257 LHFPL3Q86UP9 236 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 SUMF2Q8NBJ7 301 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 OR51A2Q8NGJ7 313 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 LGALS12Q96DT0 336 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 CPNE2Q96FN4 548 aaPredicted RBP18.76■□□□□ 0.59
USP47-205ENST00000525257 CENPNQ96H22 339 aaPredicted RBP18.76■□□□□ 0.59
USP47-205ENST00000525257 PDCD1LG2Q9BQ51 273 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 AASSQ9UDR5 926 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms