RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 BTBD17A6NE02 478 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 PIAS2O75928 621 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 DEFA4P12838 97 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 IL2RGP31785 369 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 MAS1LP35410 378 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 HLA-DRB3P79483 266 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 MALLQ13021 153 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 RTP5Q14D33 572 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 THOC3Q96J01 351 aaKnown RBP11.32□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 HIST1H2BLQ99880 126 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 RPRMQ9NS64 109 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 LOC400499M0QZD8 3231 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 A0A087WZY1 265 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 PITX3O75364 302 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 CD27P26842 260 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF611Q8N823 705 aa11.32□□□□□ -0.6
CAPN1-202ENST00000524773 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-202ENST00000524773 SPACA9Q96E40 222 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-202ENST00000524773 A0A0J9YW62 118 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ZFAND5O76080 213 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 METTL15P1P0C7V9 234 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 TCN2P20062 427 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 PAX9P55771 341 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ARL6IP1Q15041 203 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 PLPPR1Q8TBJ4 325 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 GTF3AQ92664 365 aaKnown RBP11.31□□□□□ -0.6
CAPN1-202ENST00000524773 HLA-CQ95604 372 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 SLC25A31Q9H0C2 315 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 BCO1Q9HAY6 547 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 LRFN1Q9P244 771 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-202ENST00000524773 HSPA12AO43301 675 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 BCL3P20749 454 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 DTYMKP23919 212 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ARL16Q0P5N6 197 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 P2RY6Q15077 328 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
CAPN1-202ENST00000524773 EXTL1Q92935 676 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ANGPTL4Q9BY76 406 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 OR51B6Q9H340 312 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 OPA3Q9H6K4 179 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-202ENST00000524773 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 CEBPZOSA8MTT3 80 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 PDCD6O75340 191 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 CTSSP25774 331 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 OTX1P32242 354 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-202ENST00000524773 CLN3Q13286 438 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 RHBDD2Q6NTF9 364 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 Q6ZRM9 215 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 DOCK11Q5JSL3 2073 aa11.31□□□□□ -0.6
CAPN1-202ENST00000524773 ZFP36L1Q07352 338 aaKnown RBP11.3□□□□□ -0.6
CAPN1-202ENST00000524773 ADIRFQ15847 76 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 CCDC71LQ8N9Z2 235 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 TAAR3PQ9P1P4 343 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 IGKV1-6A0A0C4DH72 117 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-202ENST00000524773 H3F3AP84243 136 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 PSG4Q00888 419 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
CAPN1-202ENST00000524773 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
CAPN1-202ENST00000524773 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-202ENST00000524773 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-202ENST00000524773 SLC22A20A6NK97 555 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 HS3ST1O14792 307 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 SYNGR3O43761 229 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 RBM11P57052 281 aaKnown RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 TESK1Q15569 626 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 MAML2Q8IZL2 1156 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 OR5L2Q8NGL0 311 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 OR1F12Q8NHA8 337 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 RPUSD4Q96CM3 377 aaKnown RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 A0A096LPE4 126 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 LOC102723971A0A1B0GUV8 181 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 A0A1W2PPZ6 126 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 SMCO3A2RU48 225 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms