RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 NUDCD2Q8WVJ2 157 aa13.43□□□□□ -0.26
LSM1-204ENST00000522515 DACT3Q96B18 629 aaPredicted RBP13.43□□□□□ -0.26
LSM1-204ENST00000522515 MMP26Q9NRE1 261 aa13.43□□□□□ -0.26
LSM1-204ENST00000522515 POLR3KQ9Y2Y1 108 aaPredicted RBP13.43□□□□□ -0.26
LSM1-204ENST00000522515 A0A0G2JMP0 313 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 A0A0X1KG70 313 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 FABP12A6NFH5 140 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 B4DSR2 109 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 SSX5O60225 188 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 CD3GP09693 182 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 IGHV4-31P0DP07 118 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 MEF2CQ06413 473 aaPredicted RBP13.42□□□□□ -0.26
LSM1-204ENST00000522515 ZNF273Q14593 569 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 PNLIPRP3Q17RR3 467 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 C11orf91Q3C1V1 193 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 SPNS3Q6ZMD2 512 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 TCF23Q7RTU1 214 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 LINC01356Q8N9X3 169 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 LY6G5BQ8NDX9 201 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 OR4M2Q8NGB6 313 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 OR13A1Q8NGR1 328 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 C8orf46Q8TAG6 207 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 MSI2Q96DH6 328 aaKnown RBP13.42□□□□□ -0.26
LSM1-204ENST00000522515 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 ABHD1Q96SE0 405 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 SOSTQ9BQB4 213 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 C12orf4Q9NQ89 552 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 V9GYH0 126 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 DSCAML1Q8TD84 2053 aa13.42□□□□□ -0.26
LSM1-204ENST00000522515 PPIAL4CA0A0B4J2A2 164 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 A0A1W2PQ09 198 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 hADV38S2A0JD32 116 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 MEIOCA2RUB1 952 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 MSMBP08118 114 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 PPIAL4GP0DN37 164 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 RCC1P18754 421 aaPredicted RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 GNG2P59768 71 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 MRPS15P82914 257 aaKnown RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 GUCA2AQ02747 115 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 IL18Q14116 193 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 NCOR1P1Q9H4R4 102 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 CHMP1AQ9HD42 196 aaPredicted RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 TRAPPC2LQ9UL33 140 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 FLNAP21333 2647 aaKnown RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 PRSS3P35030 304 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 FAM131AQ6UXB0 335 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 BAIAP2L2Q6UXY1 529 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 TRAPPC6BQ86SZ2 158 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 MRGPRDQ8TDS7 321 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 RIMS4Q9H426 269 aaPredicted RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 OR6C3Q9NZP0 311 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 LPAR3Q9UBY5 353 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 ZNF230Q9UIE0 474 aaPredicted RBP13.41□□□□□ -0.26
LSM1-204ENST00000522515 LINC00312Q9Y6C7 94 aa13.41□□□□□ -0.26
LSM1-204ENST00000522515 CREBBPQ92793 2442 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 TRGV10A0A0A0MS01 117 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 TRBV6-6A0A0A6YYG2 114 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 ENSAO43768 121 aaKnown RBP13.4□□□□□ -0.26
LSM1-204ENST00000522515 TPPPO94811 219 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 FCGR3AP08637 254 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 CCL3L1P16619 93 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 ETV6P41212 452 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 GLP1RP43220 463 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 GZMKP49863 264 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 PITPNAQ00169 270 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 SPANXN2Q5MJ10 180 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 PYHIN1Q6K0P9 492 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 ZNF880Q6PDB4 577 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 ZNF565Q8N9K5 539 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 SETD6Q8TBK2 473 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 CORO2AQ92828 525 aa13.4□□□□□ -0.26
LSM1-204ENST00000522515 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
LSM1-204ENST00000522515 MEIS3P1A6NDR6 274 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 TGFAP01135 160 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 LIPFP07098 398 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 CGB3P0DN86 165 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 CGB7P0DN87 165 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 CR1LQ2VPA4 569 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 MAFIPQ8WZ33 124 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 Q9N2K0 584 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 UBE2J1Q9Y385 318 aaPredicted RBP13.39□□□□□ -0.27
LSM1-204ENST00000522515 KIAA2026Q5HYC2 2103 aa13.39□□□□□ -0.27
LSM1-204ENST00000522515 ZANQ9Y493 2812 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 CELSR1Q9NYQ6 3014 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 DLX6P56179 175 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 ERVFRD-1P60508 538 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 ARF6P62330 175 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 ZNF79Q15937 498 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 RNASE12Q5GAN4 147 aaKnown RBP13.38□□□□□ -0.27
LSM1-204ENST00000522515 CYB5R2Q6BCY4 276 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 GVQW1Q8N7I0 195 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 GPX8Q8TED1 209 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 TMEM186Q96B77 213 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 C18orf12Q96KH6 178 aa13.38□□□□□ -0.27
LSM1-204ENST00000522515 ZNF714Q96N38 554 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms