RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GRPP07492 148 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 HCKP08631 526 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 RPS2P15880 293 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 HLA-GP17693 338 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 SRMP19623 302 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PVALBP20472 110 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 CCL1P22362 96 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 MAGEB1P43366 347 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TAS2R20P59543 309 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ERVS71-1P61550 626 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 GNB2P62879 340 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TP53I3Q53FA7 332 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PAN3Q58A45 887 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 LRRC10Q5BKY1 277 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM69Q5SWH9 247 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 AVPI1Q5T686 147 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 OR2W3Q7Z3T1 314 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 IZUMO1Q8IYV9 350 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PUSL1Q8N0Z8 303 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 C12orf45Q8N5I9 185 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 LINC01356Q8N9X3 169 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 OR10AD1Q8NGE0 317 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 OR10S1Q8NGN2 331 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 OR2G2Q8NGZ5 317 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 GLYATL2Q8WU03 294 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 FOXRED1Q96CU9 486 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 NEIL1Q96FI4 390 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 WDR89Q96FK6 387 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 GPER1Q99527 375 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TSNAXQ99598 290 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF251Q9BRH9 671 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 GINS4Q9BRT9 223 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PDCD10Q9BUL8 212 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 PKIBQ9C010 78 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 BPESC1Q9GZL8 116 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 CHST5Q9GZS9 411 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 LIME1Q9H400 295 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TCF7L1Q9HCS4 588 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ZFP57Q9NU63 452 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 C1orf123Q9NWV4 160 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 MYEF2Q9P2K5 600 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 MRM2Q9UI43 246 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF107Q9UII5 783 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 TNFSF18Q9UNG2 199 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF281Q9Y2X9 895 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 V9GY05 133 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 V9GYS6 101 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 UTP20O75691 2785 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 SPG11Q96JI7 2443 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 APCP25054 2843 aa4.77□□□□□ -1.65
CTNNA1-220ENST00000520260 CELSR2Q9HCU4 2923 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CRYBG3Q68DQ2 2970 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 PPIAL4CA0A0B4J2A2 164 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 LOC100289279A0A1B0GTE1 492 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM272A0A1B0GTI8 110 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 A0A1B0GWJ7 208 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 A0A1W2PPR1 153 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 KANTRA0A1W2PQU2 76 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 OOEPA6NGQ2 149 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF850A8MQ14 1090 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM178BH3BS89 294 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 PSMD9O00233 223 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 P2RY10O00398 339 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SMAD7O15105 426 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 XRCC3O43542 346 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 NDUFB3O43676 98 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ENSAO43768 121 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CD5LO43866 347 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CDC14BO60729 498 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 RBBP9O75884 186 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 NXPH2O95156 264 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SPDEFO95238 335 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 PTBP3O95758 552 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TTRP02766 147 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CSTBP04080 98 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ACAA1P09110 424 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 AKAIN1P0CW23 69 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 GLRA1P23415 457 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CDK2P24941 298 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CFHR2P36980 270 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 MTCP1P56278 107 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 CACNA1DQ01668 2161 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 IL24Q13007 206 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 C2orf68Q2NKX9 166 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM249Q2WGJ8 235 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 IGSF11Q5DX21 431 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 WDR38Q5JTN6 314 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SPIN3Q5JUX0 258 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM209BQ5JX69 171 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 HES5Q5TA89 166 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 DCAF12L2Q5VW00 463 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 GLT8D1Q68CQ7 371 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF600Q6ZNG1 722 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 ACOT7LQ6ZUV0 252 aa4.76□□□□□ -1.65
CTNNA1-220ENST00000520260 SSX6Q7RTT6 188 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms