RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CHST10O43529 356 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNF13O43567 381 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 NUDT21O43809 227 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CREBL2O60519 120 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CRTAPO75718 401 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GATBO75879 557 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 YIF1AO95070 293 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 KLK1P06870 262 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CTSLP07711 333 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SOD3P08294 240 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 IFI6P09912 130 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 METTL15P1P0C7V9 234 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD37P11049 281 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 NR2C1P13056 603 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TBXA2RP21731 343 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 DPP4P27487 766 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 HTR2AP28223 471 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRDX2P32119 198 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAP3K8P41279 467 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLP1RP43220 463 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CDKN1BP46527 198 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GNG10P50151 68 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB5CP51148 216 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TDGF1P3P51864 188 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10A3P58181 314 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB8AP61006 207 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 LYZP61626 148 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRDX1Q06830 199 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL15RAQ13261 267 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 COTL1Q14019 142 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMCO1Q147U7 214 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 JOSD1Q15040 202 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SHHQ15465 462 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TOMM34Q15785 309 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF77Q15935 545 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ISXQ2M1V0 245 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CHRFAM7AQ494W8 412 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCSMST1Q4G0I0 132 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 KHDC3LQ587J8 217 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM31Q5JXX7 168 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 DCST2Q5T1A1 773 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 C9orf64Q5T6V5 341 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM27D1Q5T7N8 215 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 KHDRBS2Q5VWX1 349 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF562Q6V9R5 426 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 VASH2Q86V25 355 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 COMTD1Q86VU5 262 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF547Q8IVP9 402 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF664Q8N3J9 261 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TOMM5Q8N4H5 51 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 C11orf42Q8N5U0 333 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2L5Q8NG80 312 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPR32P1Q8NGA4 272 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR56B1Q8NGI3 324 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4D11Q8NGI4 311 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR51S1Q8NGJ8 323 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR6K2Q8NGY2 324 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR6N1Q8NGY5 312 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2G2Q8NGZ5 317 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNASE11Q8TAA1 199 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC7A13Q8TCU3 470 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SFXN5Q8TD22 340 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CXorf40AQ8TE69 158 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 DTD1Q8TEA8 209 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CA5BP1Q8WTZ4 195 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 BADQ92934 168 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAL2Q969L2 176 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARL11Q969Q4 196 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 PINX1Q96BK5 328 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 MUCL1Q96DR8 90 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 PIK3IP1Q96FE7 263 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TPD52L3Q96J77 140 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 NOL4LQ96MY1 436 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 STACQ99469 402 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 WFDC6Q9BQY6 131 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNF126Q9BV68 326 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 EBPLQ9BY08 206 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CHIAQ9BZP6 476 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACTR3CQ9C0K3 210 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 MFFQ9GZY8 342 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 LINC00597Q9H2U6 94 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 LRRN3Q9H3W5 708 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 AUNIPQ9H7T9 357 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 NOX3Q9HBY0 568 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ASCL3Q9NQ33 180 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SIRT7Q9NRC8 400 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 EHFQ9NZC4 300 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ABRACLQ9P1F3 81 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 CES1P1Q9UKY3 287 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 KCNIP3Q9Y2W7 256 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF337Q9Y3M9 751 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARID1AO14497 2285 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 COL4A2P08572 1712 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SPTBP11277 2137 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A0A6YYD5 115 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIR2DL5BA0A0G2JN68 375 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIR2DL5BA0A0G2JPC4 375 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A1W2PPV9 198 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GSAPA4D1B5 854 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms