RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF17P17021 662 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TLE1Q04724 770 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 MSMO1Q15800 293 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 ACSF3Q4G176 576 aaPredicted RBP11.71□□□□□ -0.54
PABPC1-208ENST00000519004 DMRTC1Q5HYR2 192 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 KLHL24Q6TFL4 600 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TCF23Q7RTU1 214 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TCEAL8Q8IYN2 117 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 SLAMF6Q96DU3 332 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TM2D1Q9BX74 207 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 NECAP2Q9NVZ3 263 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TBX21Q9UL17 535 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 HEBP2Q9Y5Z4 205 aa11.71□□□□□ -0.54
PABPC1-208ENST00000519004 TRAV36DV7A0A075B6V5 113 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 IGKV1D-43A0A0B4J1Z2 117 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 SLC33A1O00400 549 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-208ENST00000519004 WDR1O75083 606 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 WISP1O95388 367 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 WNT2P09544 360 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 NBEAP1P0C6P0 100 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 ANOS1P23352 680 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 BLKP51451 505 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
PABPC1-208ENST00000519004 MESP2Q0VG99 397 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF850A8MQ14 1090 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 TMEM250H0YL14 139 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 HS3ST1O14792 307 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 HOXA2O43364 376 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 PRKNO60260 465 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-208ENST00000519004 IGHMP01871 453 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 LHX2P50458 406 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 RRADP55042 308 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 PAX9P55771 341 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 PPP1CBP62140 327 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 RHOGP84095 191 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.7□□□□□ -0.542e-19■■■□□ 14.9
PABPC1-208ENST00000519004 MCEMP1Q8IX19 187 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 SIGLEC12Q96PQ1 595 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
PABPC1-208ENST00000519004 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 NDUFS8O00217 210 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 IFNA5P01569 189 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 DTYMKP23919 212 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 NPBWR2P48146 333 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 ZNF286AQ9HBT8 521 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 VSTM2BA6NLU5 285 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 C17orf105B2RV13 164 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 TGFBR3LH3BV60 316 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 OPRM1P35372 400 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 COMMD2Q86X83 199 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 TNFRSF14Q92956 283 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 STARD4Q96DR4 205 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 MRGPRX1Q96LB2 322 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 APOOQ9BUR5 198 aa11.69□□□□□ -0.54
PABPC1-208ENST00000519004 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
PABPC1-208ENST00000519004 ADAM20O43506 726 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 CHST1O43916 411 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 NXPH3O95157 252 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 HLA-DOBP13765 273 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 TSPOP30536 169 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 BIDP55957 195 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 ID3Q02535 119 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 PSMF1Q92530 271 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 DYRK2Q92630 601 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 FAM71F1Q96KD3 344 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SLC46A1Q96NT5 459 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 MBNL1Q9NR56 388 aaKnown RBP11.68□□□□□ -0.54
PABPC1-208ENST00000519004 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
PABPC1-208ENST00000519004 INSL6Q9Y581 213 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 HCFC2Q9Y5Z7 792 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
PABPC1-208ENST00000519004 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 PRR19A6NJB7 356 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 F2Z2F3 143 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SH2D1BO14796 132 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 BMI1P35226 326 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SEC13P55735 322 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 KRTDAPP60985 99 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 ZP4Q12836 540 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 VAMP3Q15836 100 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 C16orf52Q8NHV5 167 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 FLVCR1-AS1Q8TAF5 88 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 CLUHP3Q96NS8 147 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 UBE2ZQ9H832 354 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-208ENST00000519004 PLEKHJ1Q9NW61 149 aa11.68□□□□□ -0.54
PABPC1-208ENST00000519004 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms