RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 COL27A1Q8IZC6 1860 aaPredicted RBP1.88□□□□□ -2.11
RNU6-840P-201ENST00000517275 IGHV3OR15-7A0A075B7D8 119 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 GOLGA8KD6RF30 607 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 GOLGA8MH3BSY2 632 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 CCRL2O00421 344 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 MFNGO00587 321 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 ISLRO14498 428 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 ATP8B1O43520 1251 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 AHSA1O95433 338 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZNF286BP0CG31 522 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 CELP19835 753 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 TGFBR1P36897 503 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 MAGOHP61326 146 aaKnown RBP1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 C4orf26Q17RF5 130 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 TMEM241Q24JQ0 296 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 TTMPQ5BVD1 217 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 SLC25A34Q6PIV7 304 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 CYHR1Q6ZMK1 362 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 TMEM144Q7Z5S9 345 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 FUNDC1Q8IVP5 155 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 TMEM251Q8N6I4 163 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 OR2K2Q8NGT1 345 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 OR5K1Q8NHB7 308 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 SMIM19Q96E16 107 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 B9D2Q9BPU9 175 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 ANAPC13Q9BS18 74 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 SCRT1Q9BWW7 348 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 POTEKPQ9BYX7 375 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 SLC19A3Q9BZV2 496 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 CHST5Q9GZS9 411 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 DMAC2Q9NW81 257 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 MARCOQ9UEW3 520 aaPredicted RBP1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 YEATS2Q9ULM3 1422 aa1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZNF706Q9Y5V0 76 aaPredicted RBP1.87□□□□□ -2.11
RNU6-840P-201ENST00000517275 PTPRKQ15262 1439 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 IGLV2-18A0A075B6J9 118 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 H3BSA7 217 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 RBBP9O75884 186 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 F8A1P23610 371 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 CBX5P45973 191 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 MP68P56378 58 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 TMEM69Q5SWH9 247 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 HENMT1Q5T8I9 393 aaKnown RBP1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 NXNL2Q5VZ03 156 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 PTRHD1Q6GMV3 140 aaKnown RBP1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 OLIG3Q7RTU3 272 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 FAM19A5Q7Z5A7 132 aaPredicted RBP1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 VN1R4Q7Z5H5 301 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 MARCH3Q86UD3 253 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 CPNE9Q8IYJ1 553 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZFP82Q8N141 532 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 Q8N402 240 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 TAMM41Q96BW9 452 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 FXYD5Q96DB9 178 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 CMBLQ96DG6 245 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 SPZ1Q9BXG8 430 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZNF436Q9C0F3 470 aaPredicted RBP1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 TXNIPQ9H3M7 391 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 USE1Q9NZ43 259 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 TMEM216Q9P0N5 145 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 POMPQ9Y244 141 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZNF835Q9Y2P0 537 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 KIAA1671Q9BY89 1806 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 CLUHO75153 1309 aa1.86□□□□□ -2.11
RNU6-840P-201ENST00000517275 LOXHD1Q8IVV2 1947 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 LEUTXA8MZ59 168 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 F5H5P2 479 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 RGS5O15539 181 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 NRASP01111 189 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 HRASP01112 189 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 KRASP01116 189 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 LTAP01374 205 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 IGHG2P01859 326 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 CGB3P0DN86 165 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 CGB7P0DN87 165 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 CTSEP14091 401 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 HLA-DMAP28067 261 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 AGTR1P30556 359 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 COILP38432 576 aaPredicted RBP1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 HSPA13P48723 471 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 PSMD7P51665 324 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 SKP2Q13309 424 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 IHHQ14623 411 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 ZCWPW2Q504Y3 356 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 CENPWQ5EE01 88 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 KHDRBS2Q5VWX1 349 aaKnown RBP1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 FAM131AQ6UXB0 335 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 FAM19A3Q7Z5A8 133 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 NIT1Q86X76 327 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 AMN1Q8IY45 258 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 KRTCAP2Q8N6L1 136 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 OR11L1Q8NGX0 322 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 REEP6Q96HR9 211 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 RSPO3Q9BXY4 272 aaPredicted RBP1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 GNB1LQ9BYB4 327 aa1.85□□□□□ -2.11
RNU6-840P-201ENST00000517275 METTL9Q9H1A3 318 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms