RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.56
TCOF1-213ENST00000514442 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-213ENST00000514442 NTF3P20783 257 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-213ENST00000514442 MST1P26927 711 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 GPR12P47775 334 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 MMP16P51512 607 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 TUSC5Q8IXB3 177 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 OR6X1Q8NH79 312 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 TMEM74BQ9NUR3 256 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 BGLAPP02818 100 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
TCOF1-213ENST00000514442 RAC3P60763 192 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 DMRTA1Q5VZB9 504 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 GALNT14Q96FL9 552 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 PRSS50Q9UI38 385 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 MASP2O00187 686 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 KLK2P20151 261 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-213ENST00000514442 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 OR8B12Q8NGG6 310 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 DYRK2Q92630 601 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 PTX4Q96A99 478 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.57
TCOF1-213ENST00000514442 C2orf88Q9BSF0 95 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 CHST5Q9GZS9 411 aa11.52□□□□□ -0.57
TCOF1-213ENST00000514442 A0A1B0GTI1 187 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 DEDDO75618 318 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 OR2M3Q8NG83 312 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 ABHD3Q8WU67 409 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 MRPL24Q96A35 216 aaKnown RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 PAM16Q9Y3D7 125 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 CDC14BO60729 498 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 PNLIPP16233 465 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 DANCRP0C864 163 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 GLIPR1P48060 266 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 PRDX4Q13162 271 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 DPPA3Q6W0C5 159 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 MRPS18BQ9Y676 258 aaKnown RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 H0YL77 283 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 IL11P20809 199 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 IL3RAP26951 378 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 ISXQ2M1V0 245 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 C6orf201Q7Z4U5 140 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 WDR13Q9H1Z4 485 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 RIMS4Q9H426 269 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-213ENST00000514442 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
TCOF1-213ENST00000514442 F8VVB4 439 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 F8VWA3 439 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 ZNF737O75373 536 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 IAPPP10997 89 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 LTBRP36941 435 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 DEGS2Q6QHC5 323 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 SPSB1Q96BD6 273 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 ZNF343Q6P1L6 599 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 VWCEQ96DN2 955 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 OR10C1Q96KK4 312 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-213ENST00000514442 RARRES2Q99969 163 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 DCAF10Q5QP82 559 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 RBMXL3Q8N7X1 1067 aaKnown RBP11.5□□□□□ -0.57
TCOF1-213ENST00000514442 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
TCOF1-213ENST00000514442 FAAP24Q9BTP7 215 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 C1QL1O75973 258 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.57
TCOF1-213ENST00000514442 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
TCOF1-213ENST00000514442 CKAP5Q14008 2032 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
TCOF1-213ENST00000514442 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 E9PQ18 207 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 PMCHP20382 165 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 GNB1P62873 340 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 TLE1Q04724 770 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 RNF122Q9H9V4 155 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 SLC2A8Q9NY64 477 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 TRBV5-7A0A0A0MS05 114 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 A0A1W2PPE3 182 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 FUT3P21217 361 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 CNN1P51911 297 aaKnown RBP11.49□□□□□ -0.57
TCOF1-213ENST00000514442 GNG3P63215 75 aa11.49□□□□□ -0.57
TCOF1-213ENST00000514442 ASB5Q8WWX0 329 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms