RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PAX5Q02548 391 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 AESQ08117 197 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 HACD4Q5VWC8 232 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 CYB5R2Q6BCY4 276 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 SIGIRRQ6IA17 410 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 METAP1DQ6UB28 335 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF841Q6ZN19 808 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 LAX1Q8IWV1 398 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 OR4S1Q8NGB4 309 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 WDFY2Q96P53 400 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 CMSS1Q9BQ75 279 aaKnown RBP8.42□□□□□ -1.06
NEDD9-214ENST00000513989 KCNIP1Q9NZI2 227 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 TRAPPC2LQ9UL33 140 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 MEIKINA0A087WXM9 373 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 TRAV20A0A0B4J274 112 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PPIAL4CA0A0B4J2A2 164 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 FOXI3A8MTJ6 420 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PHF1O43189 567 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 MT-ND4P03905 459 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 TFF1P04155 84 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 MELTFP08582 738 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PPIAL4GP0DN37 164 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 GATA3P23771 443 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PTBP1P26599 531 aaKnown RBP eCLIP8.41□□□□□ -1.064e-9■■■□□ 15.2
NEDD9-214ENST00000513989 PRSS3P35030 304 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 CBX5P45973 191 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 TAS2R20P59543 309 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 LCN2P80188 198 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 IL18Q14116 193 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 ATXN7L3Q14CW9 347 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 MOGAT2Q3SYC2 334 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PLAC9Q5JTB6 97 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 C6orf183Q5T699 404 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 PYHIN1Q6K0P9 492 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF497Q6ZNH5 498 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 TRAPPC6BQ86SZ2 158 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 MAPK1IP1LQ8NDC0 245 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 OR4M1Q8NGD0 313 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 OR6Q1Q8NGQ2 317 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 S100ZQ8WXG8 99 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 SULT4A1Q9BR01 284 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 AUNIPQ9H7T9 357 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 ZMAT3Q9HA38 289 aaKnown RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 C12orf4Q9NQ89 552 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 ING3Q9NXR8 418 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 UBE2J1Q9Y385 318 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-214ENST00000513989 DYSFO75923 2080 aa8.41□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1B0GW55 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 ODAMA1E959 279 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM235A6NFC5 223 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 A8MXK9 166 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 SULT1C2O00338 296 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 MSMBP08118 114 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L2P0CJ85 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L3P0CJ86 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L4P0CJ87 422 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L5P0CJ88 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L6P0CJ89 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L7P0CJ90 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 SELLP14151 372 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 GLIPR1P48060 266 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 MRPS10P82664 201 aaKnown RBP8.4□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM249Q2WGJ8 235 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF260Q3ZCT1 412 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4L9Q6RFH8 374 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-214ENST00000513989 FAM131AQ6UXB0 335 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 MOB1BQ7L9L4 216 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 IZUMO1Q8IYV9 350 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 FAM185AQ8N0U4 392 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 SETD6Q8TBK2 473 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 FCAMRQ8WWV6 532 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 CORO2AQ92828 525 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 C1orf159Q96HA4 380 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 MIXL1Q9H2W2 232 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 GAL3ST2Q9H3Q3 398 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 SCPEP1Q9HB40 452 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 TAS2R3Q9NYW6 316 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 DUX4Q9UBX2 424 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 OPN4Q9UHM6 478 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 AK3Q9UIJ7 227 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 RPUSD1Q9UJJ7 312 aaKnown RBP8.4□□□□□ -1.06
NEDD9-214ENST00000513989 LINC00312Q9Y6C7 94 aa8.4□□□□□ -1.06
NEDD9-214ENST00000513989 ANK2Q01484 3957 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 A0A0G2JMP0 313 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 A0A0X1KG70 313 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 KIR2DS1A0A191URI9 304 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 MFNGO00587 321 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 SPINT2O43291 252 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 TGFAP01135 160 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 HLA-DQB1P01920 261 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 ZNF728P0DKX0 622 aa8.39□□□□□ -1.07
NEDD9-214ENST00000513989 DTYMKP23919 212 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms