RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RPP14O95059 124 aaKnown RBP8.43□□□□□ -1.06
DDX41-216ENST00000513562 PRKACBP22694 351 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 CD1BP29016 333 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 C21orf33P30042 268 aaPredicted RBP8.43□□□□□ -1.06
DDX41-216ENST00000513562 SCN1BQ07699 218 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 CDK5R1Q15078 307 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 LTC4SQ16873 150 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 TMEM236Q5W0B7 351 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 SLC35F2Q8IXU6 374 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 OR10A7Q8NGE5 316 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 EME1Q96AY2 570 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 SPSB1Q96BD6 273 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 ALX4Q9H161 411 aaPredicted RBP8.43□□□□□ -1.06
DDX41-216ENST00000513562 ADGRL4Q9HBW9 690 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 ACTR3BQ9P1U1 418 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 ZNF107Q9UII5 783 aaPredicted RBP8.43□□□□□ -1.06
DDX41-216ENST00000513562 KIF25Q9UIL4 384 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
DDX41-216ENST00000513562 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 ZNF736B4DX44 427 aaPredicted RBP8.42□□□□□ -1.06
DDX41-216ENST00000513562 ZNF670-ZNF695F2Z2N8 137 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 G3V318 75 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 DEGS1O15121 323 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 ATF1P18846 271 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 SSTR5P35346 364 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 RAB9AP51151 201 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 F2RL1P55085 397 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 PAX5Q02548 391 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 UTS2BQ765I0 119 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 SSX6Q7RTT6 188 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 RFESDQ8TAC1 157 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 MRGPRDQ8TDS7 321 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 RTN4IP1Q8WWV3 396 aaPredicted RBP8.42□□□□□ -1.06
DDX41-216ENST00000513562 RFT1Q96AA3 541 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
DDX41-216ENST00000513562 OPALINQ96PE5 141 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 OR4C12Q96R67 309 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 TEX12Q9BXU0 123 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 TOLLIPQ9H0E2 274 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 CLN6Q9NWW5 311 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 TVP23BQ9NYZ1 205 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 WSB1Q9Y6I7 421 aa8.42□□□□□ -1.06
DDX41-216ENST00000513562 HECTD4Q9Y4D8 3996 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 A0A087WW49 117 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 HSPB6O14558 160 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 KRT8P05787 483 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 LGALS1P09382 135 aaKnown RBP8.41□□□□□ -1.06
DDX41-216ENST00000513562 ARSBP15848 533 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 PITPNAQ00169 270 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 GALEQ14376 348 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 FAM98BQ52LJ0 330 aaKnown RBP8.41□□□□□ -1.06
DDX41-216ENST00000513562 RSBN1Q5VWQ0 802 aaPredicted RBP8.41□□□□□ -1.06
DDX41-216ENST00000513562 TMEM179BQ7Z7N9 219 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 HAPLN4Q86UW8 402 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 SAXO1Q8IYX7 474 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 PRSS35Q8N3Z0 413 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 YIPF7Q8N8F6 280 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 OR5D18Q8NGL1 313 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 DDB2Q92466 427 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 ADI1Q9BV57 179 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 ZNF556Q9HAH1 456 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 KIAA1456Q9P272 454 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 MRPS28Q9Y2Q9 187 aaKnown RBP8.41□□□□□ -1.06
DDX41-216ENST00000513562 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
DDX41-216ENST00000513562 SORL1Q92673 2214 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 TRAV24A0A0B4J272 114 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 H0YJX3 145 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 ATP6V0E1O15342 81 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 PRKYO43930 277 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 UBCP0CG48 685 aaKnown RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 SLC2A2P11168 524 aaPredicted RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 CNTFRP26992 372 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 PAN3Q58A45 887 aaKnown RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 BCDIN3DQ7Z5W3 292 aaKnown RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 DEFB107AQ8IZN7 70 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 RDH10Q8IZV5 341 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 MINDY2Q8NBR6 621 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 SPACA5Q96QH8 159 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 MBOAT4Q96T53 435 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 BARHL1Q9BZE3 327 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 ZCCHC4Q9H5U6 513 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 RETNQ9HD89 108 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 ARGLU1Q9NWB6 273 aaPredicted RBP8.4□□□□□ -1.06
DDX41-216ENST00000513562 STUB1Q9UNE7 303 aa8.4□□□□□ -1.06
DDX41-216ENST00000513562 TRAV41A0A0B4J266 112 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 METTL15A6NJ78 407 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 TXNL1O43396 289 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 SLC25A17O43808 307 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 APOL3O95236 402 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 CST1P01037 141 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
DDX41-216ENST00000513562 MT-ND2P03891 347 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms