RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 A0A096LPE4 126 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 A0A1W2PPZ6 126 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 MSGN1A6NI15 193 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 CTAG1AP78358 180 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 FUT7Q11130 342 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR8B8Q15620 311 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 PLAC9Q5JTB6 97 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 NUFIP2Q7Z417 695 aaKnown RBP9.89□□□□□ -0.83
TCOF1-211ENST00000513346 SPSB2Q99619 263 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 LHX9Q9NQ69 397 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 A0A1B0GTI1 187 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 MMP9P14780 707 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 CD82P27701 267 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 LRP11Q86VZ4 500 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR5AS1Q8N127 324 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OIT3Q8WWZ8 545 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 PROCRQ9UNN8 238 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 DHHO43323 396 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 TTRP02766 147 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 PAFAH1B2P68402 229 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 LY6G6FQ5SQ64 297 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF891A8MT65 544 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 TNFSF11O14788 317 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 PDCD6O75340 191 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 SUCLG1P53597 346 aaKnown RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 STARD6P59095 220 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 C1QL3Q5VWW1 255 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF343Q6P1L6 599 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 POC1AQ8NBT0 407 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 ADAT3Q96EY9 351 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 VSTM2LQ96N03 204 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 C5orf66Q9H5L9 145 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 RPH3ALQ9UNE2 315 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 CRYAAP02489 173 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 NDUFB7P17568 137 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 CHRNB4P30926 498 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 RPS23P62266 143 aaKnown RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 RPS11P62280 158 aaKnown RBP eCLIP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 PRAMEF5Q5TYX0 476 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 PRAMEF6Q5VXH4 476 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 STUMQ69YW2 141 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 WDR73Q6P4I2 378 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF738Q8NE65 137 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 GPX7Q96SL4 187 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-211ENST00000513346 CACNG5Q9UF02 275 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 COL6A6A6NMZ7 2263 aa9.88□□□□□ -0.83
TCOF1-211ENST00000513346 LRRC30A6NM36 301 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 OR10G8Q8NGN5 311 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 OR2V1Q8NHB1 315 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ATG101Q9BSB4 218 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 PLA2G3Q9NZ20 509 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ABCA7Q8IZY2 2146 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 TRAV17A0A0B4J275 112 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 HLA-GP17693 338 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 USF1P22415 310 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 CD226Q15762 336 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 TBC1D26Q86UD7 250 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ADPRHL1Q8NDY3 354 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 EGLN1Q9GZT9 426 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 BRCA1P38398 1863 aaKnown RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 K7ERU9 68 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 DLL1O00548 723 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 SPINT1O43278 529 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 CDC34P49427 236 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 FHITP49789 147 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 TAS2R45P59539 299 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 RPS4XP62701 263 aaKnown RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 EDDM3AQ14507 147 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 PDCD1Q15116 288 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 OR1C1Q15619 314 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ATP6V1FQ16864 119 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 HLA-DRB5Q30154 266 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 SPNS3Q6ZMD2 512 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 MRPL30Q8TCC3 161 aaKnown RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 RNF133Q8WVZ7 376 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 H1FXQ92522 213 aaKnown RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 TP53RKQ96S44 253 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 CHRDL1Q9BU40 450 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 SLC22A20A6NK97 555 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 F8VVB4 439 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 F8VWA3 439 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 SYNGR2O43760 224 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF253O75346 499 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 HOXA6P31267 233 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 ARR3P36575 388 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 MDH2P40926 338 aaKnown RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 HIKESHIQ53FT3 197 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 WIPI1Q5MNZ9 446 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-211ENST00000513346 LPAR5Q9H1C0 372 aa9.87□□□□□ -0.83
TCOF1-211ENST00000513346 TRGV8A0A0C4DH27 118 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 A0A1W2PQF6 199 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 C5orf49A4QMS7 147 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 TRDCB7Z8K6 153 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 ALG1L2C9J202 215 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms