RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FFAR4Q5NUL3 377 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 NSUN5P2Q63ZY6 315 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PRR27Q6MZM9 219 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ZNF561Q8N587 486 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TMED6Q8WW62 240 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 DUX5Q96PT3 197 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 Q9N2K0 584 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PLSCR3Q9NRY6 295 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SLC2A8Q9NY64 477 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FAM53CQ9NYF3 392 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FLRT3Q9NZU0 649 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 METTL1Q9UBP6 276 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 TUBD1Q9UJT1 453 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PTPRZ1P23471 2315 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 SDK1Q7Z5N4 2213 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 KRBOX1C9JBD0 128 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 GATCO43716 136 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 S1PR2O95136 353 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 IGHA1P01876 353 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 IGHA2P01877 340 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MMP15P51511 669 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 DGCR2P98153 550 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 FCN2Q15485 313 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RPEL1Q2QD12 228 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RPUSD3Q6P087 351 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 C6orf201Q7Z4U5 140 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TVP23CQ96ET8 276 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 PRSS22Q9GZN4 317 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 M0QZK8 103 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TOX4O94842 621 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 ZNF205O95201 554 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MPZL1O95297 269 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MMP16P51512 607 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 OR4A5Q8NH83 315 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 RPUSD4Q96CM3 377 aaKnown RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 DPH3Q96FX2 82 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 SSBP3Q9BWW4 388 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 C11orf54Q9H0W9 315 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 PLEKHB1Q9UF11 243 aaPredicted RBP3.7□□□□□ -1.82
VCAN-209ENST00000513016 LAMB2P55268 1798 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 MICAL3Q7RTP6 2002 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 COL24A1Q17RW2 1714 aa3.7□□□□□ -1.82
VCAN-209ENST00000513016 TMEM272A0A1B0GTI8 110 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 HPRT1P00492 218 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CD40P25942 277 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 IL24Q13007 206 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 LRRC75BQ2VPJ9 315 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SAXO1Q8IYX7 474 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 COMMD1Q8N668 190 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 RBPMSQ93062 196 aaKnown RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 CHST5Q9GZS9 411 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C7orf69Q9H7B7 122 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 PEMTQ9UBM1 199 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CACNG5Q9UF02 275 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 STRCP1A6NGW2 1772 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 DUXBA0A1W2PPF3 345 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ADAM11O75078 769 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ONECUT2O95948 504 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 PI3P19957 117 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ARF6P62330 175 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 NRARPQ7Z6K4 114 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SMIM4Q8WVI0 70 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CNTD2Q9H8S5 307 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 FAM181BA6NEQ2 426 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 NPIPB6E9PJ23 425 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 IGF2P01344 180 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 LSM11P83369 360 aaKnown RBP eCLIP3.69□□□□□ -1.82
VCAN-209ENST00000513016 LY6EQ16553 131 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A47Q6Q0C1 308 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SLC26A10Q8NG04 563 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 NRG4Q8WWG1 115 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 WDR13Q9H1Z4 485 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OPN1MWP04001 364 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SEMG1P04279 462 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OPN1MW2P0DN77 364 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OPN1MW3P0DN78 364 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CRISP2P16562 243 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 FGF12P61328 243 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ASAH1Q13510 395 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SAMD13Q5VXD3 122 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 H3F3CQ6NXT2 135 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C16orf82Q7Z2V1 217 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C14orf79Q96F83 325 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CABLES2Q9BTV7 478 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ZNF107Q9UII5 783 aaPredicted RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 ZMIZ1Q9ULJ6 1067 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OR2W1Q9Y3N9 320 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ARAP2Q8WZ64 1704 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 PROB1E7EW31 1015 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 J3QR06 171 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OGG1O15527 345 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 FGF9P31371 208 aaPredicted RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 MEOX2P50222 304 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SELENOTP62341 195 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 LY6DQ14210 128 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 TM4SF20Q53R12 229 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ABHD12Q8N2K0 398 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OR4C16Q8NGL9 310 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SMIM7Q9BQ49 75 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms