RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 DYSFO75923 2080 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 TRAV24A0A0B4J272 114 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 C7orf66A4D0T2 115 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 FAM172BPA6NC97 362 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 RFPL4AA6NLU0 287 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 OR2AT4A6NND4 320 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SNRPGP15A8MWD9 76 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SRRM5B3KS81 715 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 TRDCB7Z8K6 153 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 RFPL4AL1F8VTS6 287 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SDCBPO00560 298 aaPredicted RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 WNT9BO14905 357 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 FABP7O15540 132 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 PTBP3O95758 552 aaKnown RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 CD55P08174 381 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 ADH4P08319 380 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 ZNF735P0CB33 412 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 S100GP29377 79 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 CFHR2P36980 270 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 NPY4RP50391 375 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SEC61A1P61619 476 aaKnown RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 HLA-DRB3P79483 266 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 CCL8P80075 99 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 COL10A1Q03692 680 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SURF2Q15527 256 aaPredicted RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 EFNB3Q15768 340 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 ZNF672Q499Z4 452 aaPredicted RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 ABCA11PQ4W5N1 156 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 C6orf183Q5T699 404 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 SHEQ5VZ18 495 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 CD276Q5ZPR3 534 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 Q6P435 159 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 C11orf53Q8IXP5 236 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 LILRB2Q8N423 598 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 FAM222BQ8WU58 562 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 ITLN2Q8WWU7 325 aaPredicted RBP6.8□□□□□ -1.32
HTT-209ENST00000512068 MED30Q96HR3 178 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 WDR13Q9H1Z4 485 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 TMEM165Q9HC07 324 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 Q9N2K0 584 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 RAB9BQ9NP90 201 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 ZNF581Q9P0T4 197 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
HTT-209ENST00000512068 TRBV6-6A0A0A6YYG2 114 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 TRAV38-1A0A0B4J264 116 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 BET1O15155 118 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 HSPA12AO43301 675 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 NAPSAO96009 420 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 HLA-AP01891 365 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 OR4E1P0C645 316 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 GSTT2P0CG29 244 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 ZNF728P0DKX0 622 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 ANXA3P12429 323 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 AKR1C4P17516 323 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 CD34P28906 385 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 FCGR2CP31995 323 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 PRDX2P32119 198 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 CD80P33681 288 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 EIF2B2P49770 351 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 FXYD4P59646 89 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 UBE2MP61081 183 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 CD83Q01151 205 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 TFF3Q07654 80 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 KCNJ8Q15842 424 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 KRBOX4Q5JUW0 171 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 ZNF626Q68DY1 528 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 LIN54Q6MZP7 749 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 LPCAT3Q6P1A2 487 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 FAHD2BQ6P2I3 314 aaPredicted RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 TRAT1Q6PIZ9 186 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 Q6ZS49 121 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 OVCH2Q7RTZ1 564 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 GCSAMQ8N6F7 178 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 ZNF565Q8N9K5 539 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 CCDC71LQ8N9Z2 235 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 UXS1Q8NBZ7 420 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 OR5D13Q8NGL4 314 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 OR4A4PQ8NGN8 299 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 OR13C8Q8NGS7 320 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 OR10J5Q8NHC4 309 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 MRPL30Q8TCC3 161 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 Q8TCH9 128 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 MARCH1Q8TCQ1 289 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 NEUROG1Q92886 237 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 NINJ1Q92982 152 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 TOMM40LQ969M1 308 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 FAHD2AQ96GK7 314 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 VRK1Q99986 396 aaPredicted RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 NEURL2Q9BR09 285 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 SEC22CQ9BRL7 303 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 RAB1BQ9H0U4 201 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 ALX4Q9H161 411 aaPredicted RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 GCM1Q9NP62 436 aa6.79□□□□□ -1.32
HTT-209ENST00000512068 MYOZ1Q9NP98 299 aaPredicted RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 RBM7Q9Y580 266 aaKnown RBP6.79□□□□□ -1.32
HTT-209ENST00000512068 LAMA5O15230 3695 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms