RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 Q8IYB0 196 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 OR8H3Q8N146 312 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 FBLIM1Q8WUP2 373 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 UBE2E2Q96LR5 201 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 YIPF3Q9GZM5 350 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 Q9H521 79 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 LIN7CQ9NUP9 197 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 C19orf73Q9NVV2 129 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 IKZF2Q9UKS7 526 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 RPL36Q9Y3U8 105 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 A0A1W2PQL4 384 aaPredicted RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 DAPL1A0PJW8 107 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 DHRS7CA6NNS2 312 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 NCBP2LA6PVI3 153 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 PTGES3LE9PB15 166 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 ZNF670-ZNF695F2Z2N8 137 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 OVOL1O14753 267 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 SLC25A17O43808 307 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 ZNF254O75437 659 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 IGKV1D-33P01593 117 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 IGKV1-33P01594 117 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 IGHV4-30-4P0DP06 118 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 PSMB8P28062 276 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 GDNFP39905 211 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 MTNR1BP49286 362 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 RAB7AP51149 207 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 RUNX1Q01196 453 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 TMED1Q13445 227 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 EBI3Q14213 229 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 ZNF146Q15072 292 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 PLEKHG7Q6ZR37 379 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 AHSA2Q719I0 299 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 LHFPL3Q86UP9 236 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 LYPD6Q86Y78 171 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 OR52I1Q8NGK6 324 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 DDB2Q92466 427 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 GGHQ92820 318 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 EMG1Q92979 244 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 ST6GALNAC6Q969X2 333 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 NUFIP1Q9UHK0 495 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 EXOGQ9Y2C4 368 aaKnown RBP8.99□□□□□ -0.97
RNF4-216ENST00000511859 V9GYS6 101 aa8.99□□□□□ -0.97
RNF4-216ENST00000511859 FAM230AA0A1W2PPH8 454 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 A0A1W2PPI3 338 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 I3L521 148 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 J3QR06 171 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 DENRO43583 198 aaKnown RBP8.98□□□□□ -0.97
RNF4-216ENST00000511859 FADS2O95864 444 aaKnown RBP8.98□□□□□ -0.97
RNF4-216ENST00000511859 VDAC1P21796 283 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 PTGFRP43088 359 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 KIR3DL2P43630 455 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 OR3A1P47881 315 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 CFHR3Q02985 330 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 ZNF85Q03923 595 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 RAB40BQ12829 278 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 MADCAM1Q13477 382 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 MED21Q13503 144 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 SRSF7Q16629 238 aaKnown RBP eCLIP8.98□□□□□ -0.97
RNF4-216ENST00000511859 ZNF829Q3KNS6 432 aaPredicted RBP8.98□□□□□ -0.97
RNF4-216ENST00000511859 TP53I3Q53FA7 332 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 ZNF322Q6U7Q0 402 aaPredicted RBP8.98□□□□□ -0.97
RNF4-216ENST00000511859 SATL1Q86VE3 508 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 OR14K1Q8NGZ2 314 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 DCUN1D4Q92564 292 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 SLAMF9Q96A28 289 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 PSORS1C1Q9UIG5 152 aa8.98□□□□□ -0.97
RNF4-216ENST00000511859 ZNF729A6NN14 1252 aaPredicted RBP8.97□□□□□ -0.97
RNF4-216ENST00000511859 J3QRE1 110 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 SH2D1BO14796 132 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 INMTO95050 263 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 RPP14O95059 124 aaKnown RBP8.97□□□□□ -0.97
RNF4-216ENST00000511859 TTRP02766 147 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 OR2T7P0C7T2 308 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 OR5H8P0DN80 308 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ETV1P50549 477 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 FUT6P51993 359 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ST3GAL4Q11206 333 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 SPIN3Q5JUX0 258 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ASPHD1Q5U4P2 390 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 TMEM65Q6PI78 240 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 SLC25A26Q70HW3 274 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 SGPP2Q8IWX5 399 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ZNF679Q8IYX0 411 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 FAM58AQ8N1B3 248 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 Q8N1Y9 231 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 STX19Q8N4C7 294 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ACBD7Q8N6N7 88 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ZNF491Q8N8L2 437 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 RBMXL1Q96E39 390 aaKnown RBP8.97□□□□□ -0.97
RNF4-216ENST00000511859 PLCXD1Q9NUJ7 323 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 PAK1IP1Q9NWT1 392 aaPredicted RBP8.97□□□□□ -0.97
RNF4-216ENST00000511859 SCN3BQ9NY72 215 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 GNG8Q9UK08 70 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 ZNF580Q9UK33 172 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 GTF2A1LQ9UNN4 478 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 VSIG4Q9Y279 399 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms