RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BRI3O95415 125 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 GPR75O95800 540 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 IGLV1-47P01700 117 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CRYGCP07315 174 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CT62P0C5K7 136 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC35E2BP0CK96 405 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CBR1P16152 277 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 GABRR1P24046 479 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 IL12AP29459 219 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 EIF1P41567 113 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PPICP45877 212 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TTPAP49638 278 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 WNT4P56705 351 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 KLF3P57682 345 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TCTAP57738 103 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PLP1P60201 277 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC25A11Q02978 314 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 GK3PQ14409 553 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PDK2Q15119 407 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 MOGQ16653 247 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 LRRC75BQ2VPJ9 315 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TRMT5Q32P41 509 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TP53I3Q53FA7 332 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 C2orf83Q53S99 150 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 RESP18Q5W5W9 173 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PPP1R2P3Q6NXS1 205 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 FAM173BQ6P4H8 233 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 AGTRAPQ6RW13 159 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ACOT7LQ6ZUV0 252 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PID1Q7Z2X4 250 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 FAM220AQ7Z4H9 259 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 VTCN1Q7Z7D3 282 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 DHDDSQ86SQ9 333 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PQLC3Q8N755 202 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CCDC71LQ8N9Z2 235 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OR52H1Q8NGJ2 320 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OR56B4Q8NH76 319 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 MAGEE2Q8TD90 523 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 GPX8Q8TED1 209 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 SNF8Q96H20 258 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ATP6V1G3Q96LB4 118 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OLFM3Q96PB7 478 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PANX1Q96RD7 426 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CLCC1Q96S66 551 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 VAT1Q99536 393 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ARHGDIGQ99819 225 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 KLHDC3Q9BQ90 382 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ANKRD60Q9BZ19 345 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 IL22Q9GZX6 179 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OR51J1Q9H342 316 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ANKRD19PQ9H560 264 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 NIPAL2Q9H841 368 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 SIRT7Q9NRC8 400 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM106BQ9NUM4 274 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 RMND1Q9NWS8 449 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 LYARQ9NX58 379 aaKnown RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 BFARQ9NZS9 450 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CLN8Q9UBY8 286 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PITPNC1Q9UKF7 332 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PACSIN2Q9UNF0 486 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 STARD10Q9Y365 291 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A0G2JRQ6 117 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 LOC100506127A0A0U1RQW1 187 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A1B0GVI7 797 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 E5RI56 91 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 SCELO95171 688 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 SNAPINO95295 136 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 YEATS4O95619 227 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 OXSR1O95747 527 aaPredicted RBP2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 CSTAP01040 98 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 NPPAP01160 153 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 IFNA14P01570 189 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 SPNP16150 400 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 FUT3P21217 361 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 KITLGP21583 273 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 PRKACBP22694 351 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 RPS3P23396 243 aaKnown RBP eCLIP2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 GCAP28676 217 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 RRM2P31350 389 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 IFNA8P32881 189 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 CRATP43155 626 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 SSR2P43308 183 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 RAB11AP62491 216 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 ADARB1P78563 741 aaKnown RBP2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 PAX5Q02548 391 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 PRPSAP1Q14558 356 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 POU6F1Q14863 301 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 TGFBIQ15582 683 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 RAB11BQ15907 218 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 TRIM16LQ309B1 348 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 TTLL9Q3SXZ7 439 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM176BQ3YBM2 270 aaPredicted RBP2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 Q3ZCU0 254 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 VPS26BQ4G0F5 336 aa2.34□□□□□ -2.03
TOPBP1-208ENST00000511439 ACSBG2Q5FVE4 666 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms