RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FASP25445 335 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 IL12AP29459 219 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 S100A3P33764 101 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 NAA10P41227 235 aaPredicted RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 HIST1H3AP68431 136 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 ZNF92Q03936 586 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 DYNC1I2Q13409 638 aaKnown RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 AQP6Q13520 282 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 ZNF273Q14593 569 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 HIST2H3PS2Q5TEC6 136 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 DHRS4L2Q6PKH6 230 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 HIST2H3AQ71DI3 136 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 DPY19L4Q7Z388 723 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 HDDC2Q7Z4H3 204 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 OR4M1Q8NGD0 313 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 OR1N2Q8NGR9 330 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 CAPSLQ8WWF8 208 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 VPS33AQ96AX1 596 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 MCHR1Q99705 422 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 PRSS27Q9BQR3 290 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 ZNF426Q9BUY5 554 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 CACYBPQ9HB71 228 aaKnown RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 USE1Q9NZ43 259 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 STX18Q9P2W9 335 aaKnown RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 NOP16Q9Y3C1 178 aaKnown RBP4.42□□□□□ -1.7
USP53-206ENST00000510737 SELENOKQ9Y6D0 94 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 KIAA2026Q5HYC2 2103 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 FAT1Q14517 4588 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 hCG_1809904A0A1W2PP81 198 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 A0A1W2PPE2 198 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 A0A1W2PR64 198 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 OR2AT4A6NND4 320 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 F5H5K5 113 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 H7C1C5 153 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 BHLHE40O14503 412 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 IMPA2O14732 288 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 OVOL1O14753 267 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 POLR3GO15318 223 aaPredicted RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 CHP2O43745 196 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 PSG2P11465 335 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 NR2C1P13056 603 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 MDH1P40925 334 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 GABRA2P47869 451 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 RGS8P57771 180 aaPredicted RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 RPL27P61353 136 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 LSM6P62312 80 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 LCN6P62502 163 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 RPL31P62899 125 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 SLC35B1P78383 322 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 SPIBQ01892 262 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 KIAA0141Q14154 515 aaPredicted RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 MINOS1Q5TGZ0 78 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 MRPL21Q7Z2W9 205 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 RBM45Q8IUH3 476 aaKnown RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 STPG2Q8N412 459 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 TMEM185AQ8NFB2 350 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 OR6Q1Q8NGQ2 317 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 OR13D1Q8NGV5 346 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 OR2T27Q8NH04 317 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 FNDC8Q8TC99 324 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 ACMSDQ8TDX5 336 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 DLX4Q92988 240 aaPredicted RBP4.41□□□□□ -1.7
USP53-206ENST00000510737 OR52E6Q96RD3 313 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 COQ7Q99807 217 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 TLNRD1Q9H1K6 362 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 EGLN3Q9H6Z9 239 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 SP140LQ9H930 580 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 TPT1P8Q9HAU6 139 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 ATPIF1Q9UII2 106 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 ZNF222Q9UK12 451 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 MINOS1-NBL1R4GNA1 71 aa4.41□□□□□ -1.7
USP53-206ENST00000510737 A0A1W2PPQ1 181 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 GGT3PA6NGU5 568 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 CPSF4LA6NMK7 179 aaKnown RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 E9PBE3 544 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 M0QZK8 103 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 RFXANKO14593 260 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 AKR7A2O43488 359 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 OR7A10O76100 309 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 RENP00797 406 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 MT-ND1P03886 318 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 NME5P56597 212 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 NCALDP61601 193 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 MZT1Q08AG7 82 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 TRAP1Q12931 704 aaKnown RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 PCLAFQ15004 111 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 CCDC153Q494R4 210 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 OR4A47Q6IF82 309 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 LCN8Q6JVE9 175 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 C8orf74Q6P047 294 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 TSEN54Q7Z6J9 526 aaKnown RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 CALHM1Q8IU99 346 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 LRRC75AQ8NAA5 344 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 OR4D11Q8NGI4 311 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 OR6T1Q8NGN1 323 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 OR2AE1Q8NHA4 323 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 PFN4Q8NHR9 129 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms