RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TPTE2P1Q5T6R2 138 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 C16orf82Q7Z2V1 217 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 SUMF2Q8NBJ7 301 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 OR9G1Q8NH87 305 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 FBLIM1Q8WUP2 373 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 DPCDQ9BVM2 203 aaPredicted RBP18.41■□□□□ 0.54
SNF8-209ENST00000510558 IFT22Q9H7X7 185 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 PAK1IP1Q9NWT1 392 aaPredicted RBP18.41■□□□□ 0.54
SNF8-209ENST00000510558 IDI2-AS1Q9NZ38 188 aa18.41■□□□□ 0.54
SNF8-209ENST00000510558 TRAV8-7A0A075B6U6 113 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 PNMA8CA0A1B0GUJ8 204 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 ANKRD65E5RJM6 399 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 LY6LH3BQJ8 138 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 IL1AP01583 271 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 FSTP19883 344 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 AHSA2Q719I0 299 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 STX19Q8N4C7 294 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 MRGPRDQ8TDS7 321 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 OR14A2Q96R54 314 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 OR5M11Q96RB7 305 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 WNT10AQ9GZT5 417 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 MMP28Q9H239 520 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 LINC00574Q9H8X3 128 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 PLCXD1Q9NUJ7 323 aa18.4■□□□□ 0.54
SNF8-209ENST00000510558 TRBV5-7A0A0A0MS05 114 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 GEMIN2O14893 280 aaKnown RBP18.39■□□□□ 0.53
SNF8-209ENST00000510558 MYL12BO14950 172 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 ZNF780AO75290 641 aaPredicted RBP18.39■□□□□ 0.53
SNF8-209ENST00000510558 PEX14O75381 377 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 VDAC2P45880 294 aaPredicted RBP18.39■□□□□ 0.53
SNF8-209ENST00000510558 TMEM95Q3KNT9 176 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 SLC22A6Q4U2R8 563 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 LINC00596Q86U02 117 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 BPIFB6Q8NFQ5 453 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 WIPF2Q8TF74 440 aaPredicted RBP18.39■□□□□ 0.53
SNF8-209ENST00000510558 LEAP2Q969E1 77 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 AKR1E2Q96JD6 320 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 LIN7BQ9HAP6 207 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 PCDHB16Q9NRJ7 776 aa18.39■□□□□ 0.53
SNF8-209ENST00000510558 A0A1W2PP11 408 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 A0A1W2PPK0 400 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 OOSP1A8MZH6 123 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 NPIPB11E5RHQ5 1161 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 CD28P10747 220 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 WNT4P56705 351 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 LTC4SQ16873 150 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 MPV17LQ2QL34 196 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 FBLN7Q53RD9 439 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 CCDC144NLQ6NUI1 221 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 LYG1Q8N1E2 194 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 RFESDQ8TAC1 157 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 CAPSLQ8WWF8 208 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 SLC25A33Q9BSK2 321 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 VCXQ9H320 206 aa18.38■□□□□ 0.53
SNF8-209ENST00000510558 AMMECR1Q9Y4X0 333 aaPredicted RBP18.38■□□□□ 0.53
SNF8-209ENST00000510558 TRAV39A0A0B4J263 110 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 J3QR06 171 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 IGHV3-7P01780 117 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 GTF2F2P13984 249 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 SSTR5P35346 364 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 MNDAP41218 407 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 DOC2BQ14184 412 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 JAGN1Q8N5M9 183 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 MUL1Q969V5 352 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 RPEQ96AT9 228 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 OCSTAMPQ9BR26 566 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 FKBP14Q9NWM8 211 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 PLXNB1O43157 2135 aa18.37■□□□□ 0.53
SNF8-209ENST00000510558 TMEM30CPA0ZSE6 113 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 OR2F2O95006 317 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 OPN1MWP04001 364 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 OPN1MW2P0DN77 364 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 OPN1MW3P0DN78 364 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 CELP19835 753 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 GPR176Q14439 515 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 NSUN5P1Q3KNT7 163 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 ATAD3CQ5T2N8 411 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 C1QL4Q86Z23 238 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 NANOGP1Q8N7R0 232 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 OR10A7Q8NGE5 316 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 TFAP2CQ92754 450 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 TOMM40LQ969M1 308 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 RBM14Q96PK6 669 aaKnown RBP18.36■□□□□ 0.53
SNF8-209ENST00000510558 DERL3Q96Q80 235 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 PSG11Q9UQ72 335 aa18.36■□□□□ 0.53
SNF8-209ENST00000510558 MRPS28Q9Y2Q9 187 aaKnown RBP18.36■□□□□ 0.53
SNF8-209ENST00000510558 CD1AP06126 327 aa18.35■□□□□ 0.53
SNF8-209ENST00000510558 PIN1P1O15428 100 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 MAS1P04201 325 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 GNG10P50151 68 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 ABCA11PQ4W5N1 156 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 GLIPR1L1Q6UWM5 242 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 NDUFA11Q86Y39 141 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 NEK7Q8TDX7 302 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 CITED2Q99967 270 aaPredicted RBP18.34■□□□□ 0.53
SNF8-209ENST00000510558 DCLRE1BQ9H816 532 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 ERGIC3Q9Y282 383 aa18.34■□□□□ 0.53
SNF8-209ENST00000510558 GZMHP20718 246 aa18.33■□□□□ 0.52
SNF8-209ENST00000510558 EMX1Q04741 257 aaPredicted RBP18.33■□□□□ 0.52
SNF8-209ENST00000510558 MADCAM1Q13477 382 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms