RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
SQSTM1-213ENST00000510187 SLC2A9Q9NRM0 540 aa13.74□□□□□ -0.21
SQSTM1-213ENST00000510187 LSM5Q9Y4Y9 91 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-213ENST00000510187 ZGRF1Q86YA3 2104 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 BORCS7-ASMTA0A0B4J1R7 106 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 RNASEK-C17orf49H0YIS7 233 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 FBXO24O75426 580 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 TNFSF13O75888 250 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 GLI4P10075 376 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 P2RY1P47900 373 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 HERV-K104P61576 105 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 EIF2S3LQ2VIR3 472 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 FBXW9Q5XUX1 488 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 SAXO1Q8IYX7 474 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 NAXEQ8NCW5 288 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 MSI2Q96DH6 328 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 MARS2Q96GW9 593 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 FAM212BQ9NTI7 297 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 ZNF581Q9P0T4 197 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 RP1L1Q8IWN7 2480 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 RPL36A-HNRNPH2H7BZ11 118 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 ATXN7O15265 892 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 SEC11BP0C7V7 166 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 PATE4P0C8F1 98 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 PVALBP20472 110 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 MYO7BQ6PIF6 2116 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 OR10Z1Q8NGY1 313 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 FGFBP3Q8TAT2 258 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 DOCK7Q96N67 2140 aa13.73□□□□□ -0.21
SQSTM1-213ENST00000510187 GLAP06280 429 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 COX5BP10606 129 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 CEACAM8P31997 349 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 DVL1P1P54792 670 aaPredicted RBP13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 CASP6P55212 293 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 FXYD4P59646 89 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 HMGN3Q15651 99 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 SWI5Q1ZZU3 235 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 FAM219AQ8IW50 185 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 PIGCQ92535 297 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 STARD4Q96DR4 205 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 TMEM231Q9H6L2 316 aa13.72□□□□□ -0.21
SQSTM1-213ENST00000510187 TRGV8A0A0C4DH27 118 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 SCGB1D2O95969 90 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 RAB5CP51148 216 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 FOXG1P55316 489 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 Q6ZRG5 221 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 ZNF611Q8N823 705 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 DYRK2Q92630 601 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 GINS3Q9BRX5 216 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 PLSCR4Q9NRQ2 329 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 PROCRQ9UNN8 238 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 FREM1Q5H8C1 2179 aa13.71□□□□□ -0.21
SQSTM1-213ENST00000510187 PQLC2LA1A4F0 135 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ST8SIA3O43173 380 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 RND3P61587 244 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ARF1P84077 181 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 SP6Q3SY56 376 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 TMEM88Q6PEY1 159 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 GLYATL2Q8WU03 294 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ERGIC1Q969X5 290 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ZNF442Q9H7R0 627 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 FAM96BQ9Y3D0 163 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 CNOT4O95628 575 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 CDS2O95674 445 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 PPYP01298 95 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 AADACP22760 399 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 PAX6P26367 422 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 NPBWR1P48145 328 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 UCP2P55851 309 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 Q6ZT83 130 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 CBLN2Q8IUK8 224 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 CPEB3Q8NE35 698 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 OR5L1Q8NGL2 311 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ABHD14BQ96IU4 210 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 REPIN1Q9BWE0 567 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 STRAPQ9Y3F4 350 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 SHANK1Q9Y566 2161 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 KPTNQ9Y664 436 aa13.7□□□□□ -0.22
SQSTM1-213ENST00000510187 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 A0A096LPE4 126 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 A0A0G2JNJ9 132 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 A0A1W2PPZ6 126 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 FAM157AC9JC47 383 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 CGAP01215 116 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 DANCRP0C864 163 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 SPP1P10451 314 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 CA7P43166 264 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 PRSS12P56730 875 aa13.69□□□□□ -0.22
SQSTM1-213ENST00000510187 DAZAP2Q15038 168 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms