RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 HES1Q14469 280 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF691Q5VV52 312 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 CCDC144NLQ6NUI1 221 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF529Q6P280 563 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 FAM220AQ7Z4H9 259 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 SLC35E3Q7Z769 313 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 Q8NFD4 153 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 OR51D1Q8NGF3 324 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 CREB3L1Q96BA8 519 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 LGALS12Q96DT0 336 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 NEK6Q9HC98 313 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
RAB40C-202ENST00000509637 TENM2Q9NT68 2774 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 DAPL1A0PJW8 107 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 GABRB1P18505 474 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 CFHR3Q02985 330 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 BNIP1Q12981 228 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 PAN3Q58A45 887 aaKnown RBP12.46□□□□□ -0.41
RAB40C-202ENST00000509637 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 TMEM104Q8NE00 496 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 ST6GALNAC6Q969X2 333 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 HSPB9Q9BQS6 159 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 U3KQK5 164 aa12.46□□□□□ -0.41
RAB40C-202ENST00000509637 IGHV1-3A0A0C4DH29 117 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 SLC31A2O15432 143 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 VHLP40337 213 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 GPR12P47775 334 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 MTNR1BP49286 362 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 ARHGDIBP52566 201 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
RAB40C-202ENST00000509637 MADCAM1Q13477 382 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
RAB40C-202ENST00000509637 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 C5orf24Q7Z6I8 188 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 OR8H3Q8N146 312 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 PXT1Q8NFP0 134 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 ORAI1Q96D31 301 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
RAB40C-202ENST00000509637 RHOFQ9HBH0 211 aa12.45□□□□□ -0.42
RAB40C-202ENST00000509637 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
RAB40C-202ENST00000509637 SULT1B1O43704 296 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 HCKP08631 526 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 RAB7AP51149 207 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
RAB40C-202ENST00000509637 F2RL1P55085 397 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 SNRPGP62308 76 aaKnown RBP12.44□□□□□ -0.42
RAB40C-202ENST00000509637 PAX5Q02548 391 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 ZIK1Q3SY52 487 aaPredicted RBP12.44□□□□□ -0.42
RAB40C-202ENST00000509637 XAF1Q6GPH4 301 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 ACBD7Q8N6N7 88 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 RNF152Q8N8N0 203 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 ZNF565Q8N9K5 539 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 RFKQ969G6 155 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
RAB40C-202ENST00000509637 IGHV3-43A0A0B4J1X8 118 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 A0A1W2PP11 408 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 HSD17B6O14756 317 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 CDRT1O95170 752 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 ALPLP05186 524 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 IGHV3-43DP0DP04 118 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
RAB40C-202ENST00000509637 RAB25P57735 213 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 GALEQ14376 348 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 MOB3BQ86TA1 216 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 HAVCR2Q8TDQ0 301 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 DPF1Q92782 380 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
RAB40C-202ENST00000509637 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 AMBNQ9NP70 447 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 PCDHB16Q9NRJ7 776 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 TAS2R4Q9NYW5 299 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 AMMECR1Q9Y4X0 333 aaPredicted RBP12.43□□□□□ -0.42
RAB40C-202ENST00000509637 SIRT4Q9Y6E7 314 aaPredicted RBP12.43□□□□□ -0.42
RAB40C-202ENST00000509637 RYR2Q92736 4967 aa12.43□□□□□ -0.42
RAB40C-202ENST00000509637 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 C21orf33P30042 268 aaPredicted RBP12.42□□□□□ -0.42
RAB40C-202ENST00000509637 ZNF134P52741 427 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 IL13RA2Q14627 380 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 SERPINA12Q8IW75 414 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 IZUMO1Q8IYV9 350 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 TNFAIP8L1Q8WVP5 186 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 TRUB1Q8WWH5 349 aaKnown RBP12.42□□□□□ -0.42
RAB40C-202ENST00000509637 RITA1Q96K30 269 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 ALG8Q9BVK2 526 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 DPCDQ9BVM2 203 aaPredicted RBP12.42□□□□□ -0.42
RAB40C-202ENST00000509637 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
RAB40C-202ENST00000509637 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms