RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SLC25A38Q96DW6 304 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 ZNF714Q96N38 554 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
RNF4-213ENST00000509388 GAL3ST2Q9H3Q3 398 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 NCOR1P1Q9H4R4 102 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 ZMAT3Q9HA38 289 aaKnown RBP12.24□□□□□ -0.45
RNF4-213ENST00000509388 UBE2J1Q9Y385 318 aaPredicted RBP12.24□□□□□ -0.45
RNF4-213ENST00000509388 LINC00312Q9Y6C7 94 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
RNF4-213ENST00000509388 OTOGQ6ZRI0 2925 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 A6NHS1 94 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
RNF4-213ENST00000509388 SERPINE3A8MV23 424 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 TOX4O94842 621 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 MT-ND4P03905 459 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 HIST1H1DP16402 221 aaKnown RBP12.23□□□□□ -0.45
RNF4-213ENST00000509388 PAX5Q02548 391 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 PAX2Q02962 417 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 PAX8Q06710 450 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 ZNF273Q14593 569 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 TMEM69Q5SWH9 247 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 TEX29Q8N6K0 151 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 DYRK2Q92630 601 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 PCGF1Q9BSM1 259 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
RNF4-213ENST00000509388 KCNIP1Q9NZI2 227 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 AK3Q9UIJ7 227 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 KPTNQ9Y664 436 aa12.23□□□□□ -0.45
RNF4-213ENST00000509388 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 M0R1W7 72 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 XRCC3O43542 346 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 EIF4EP06730 217 aaKnown RBP12.22□□□□□ -0.45
RNF4-213ENST00000509388 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
RNF4-213ENST00000509388 ZNF728P0DKX0 622 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 CCL3L1P16619 93 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 GZMHP20718 246 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 CDK2P24941 298 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 GNG2P59768 71 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 KRTAP1-1Q07627 177 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 CR1LQ2VPA4 569 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 C6orf183Q5T699 404 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 OR4K15Q8NH41 348 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 MRGPRDQ8TDS7 321 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 CORO2AQ92828 525 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 DACT3Q96B18 629 aaPredicted RBP12.22□□□□□ -0.45
RNF4-213ENST00000509388 WDFY2Q96P53 400 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
RNF4-213ENST00000509388 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 C12orf4Q9NQ89 552 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 TAS2R3Q9NYW6 316 aa12.22□□□□□ -0.45
RNF4-213ENST00000509388 MRPS7Q9Y2R9 242 aaKnown RBP12.22□□□□□ -0.45
RNF4-213ENST00000509388 TRAV39A0A0B4J263 110 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 ZNF729A6NN14 1252 aaPredicted RBP12.21□□□□□ -0.45
RNF4-213ENST00000509388 MFNGO00587 321 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 CTDSP2O14595 271 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 ELK1P19419 428 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 HNF1AP20823 631 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 S100A5P33763 92 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 PNLIPRP3Q17RR3 467 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 TRAT1Q6PIZ9 186 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 Q71RC1 249 aaPredicted RBP12.21□□□□□ -0.45
RNF4-213ENST00000509388 IZUMO1Q8IYV9 350 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 OR13A1Q8NGR1 328 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 TMPRSS13Q9BYE2 586 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 MMP27Q9H306 513 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 METTL8Q9H825 291 aaKnown RBP12.21□□□□□ -0.45
RNF4-213ENST00000509388 EXTL2Q9UBQ6 330 aa12.21□□□□□ -0.45
RNF4-213ENST00000509388 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 CR1P17927 2039 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
RNF4-213ENST00000509388 TMEM235A6NFC5 223 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 SPINT2O43291 252 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 PITPNAQ00169 270 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 OLFML2AQ68BL7 652 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 VMO1Q7Z5L0 202 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 RTN4RL2Q86UN3 420 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 MRPL30Q8TCC3 161 aaKnown RBP12.2□□□□□ -0.46
RNF4-213ENST00000509388 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 MGAT4AQ9UM21 535 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 KCNK7Q9Y2U2 307 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 A3GALT2U3KPV4 340 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 MED13LQ71F56 2210 aa12.2□□□□□ -0.46
RNF4-213ENST00000509388 KBTBD11-OT1A0A1B0GTJ5 212 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 C17orf98A8MV24 154 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 ORC5O43913 435 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 CLPXO76031 633 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
RNF4-213ENST00000509388 TAS2R20P59543 309 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 MOB1BQ7L9L4 216 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms