RNA–Protein interactions for RNA: ENST00000508830.5

CAST-224, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-224ENST00000508830 MED13Q9UHV7 2174 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 CDS2O95674 445 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 RND3P61587 244 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 ARF1P84077 181 aaKnown RBP13.49□□□□□ -0.25
CAST-224ENST00000508830 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 SOHLH1Q5JUK2 328 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 ZNF565Q8N9K5 539 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 OR1J1Q8NGS3 322 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 TMEM56Q96MV1 263 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 LYRM2Q9NU23 88 aaPredicted RBP13.49□□□□□ -0.25
CAST-224ENST00000508830 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 GTF3C1Q12789 2109 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 PMELP40967 661 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 SRPXP78539 464 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 S100A12P80511 92 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 C17orf78Q8N4C9 275 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 OR51B6Q9H340 312 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 NIT2Q9NQR4 276 aa13.49□□□□□ -0.25
CAST-224ENST00000508830 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 ARGFXA6NJG6 315 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 TXNL1O43396 289 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 TK1P04183 234 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 GFRA1P56159 465 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 COLCA1Q6ZS62 124 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 FAM185AQ8N0U4 392 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 ZNF295-AS1Q8N0V1 137 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 SUMF2Q8NBJ7 301 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 TNRC6BQ9UPQ9 1833 aaKnown RBP13.48□□□□□ -0.25
CAST-224ENST00000508830 RBFOX3A6NFN3 312 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 CHST1O43916 411 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 PITX3O75364 302 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 CLN5O75503 358 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 PAX9P55771 341 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 FOXO1Q12778 655 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 RHEBQ15382 184 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
CAST-224ENST00000508830 P4HA3Q7Z4N8 544 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 LFNGQ8NES3 379 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
CAST-224ENST00000508830 TAAR3PQ9P1P4 343 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 URGCP-MRPS24S4R325 110 aa13.48□□□□□ -0.25
CAST-224ENST00000508830 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 CYTIPO60759 359 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
CAST-224ENST00000508830 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 UBALD1Q8TB05 177 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 PLEKHF2Q9H8W4 249 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
CAST-224ENST00000508830 NOSIPQ9Y314 301 aaKnown RBP13.47□□□□□ -0.25
CAST-224ENST00000508830 A0A1B0GW64 132 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 H3BQ15 152 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 HS3ST1O14792 307 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 OR2C1O95371 312 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 ZNF266Q14584 549 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 PCSK4Q6UW60 755 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 TUSC5Q8IXB3 177 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 Q8NFD4 153 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 PSMF1Q92530 271 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 RDH5Q92781 318 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 RAB39BQ96DA2 213 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 CALHM2Q9HA72 323 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 METTL1Q9UBP6 276 aaKnown RBP13.47□□□□□ -0.25
CAST-224ENST00000508830 TCFL5Q9UL49 500 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 RNF115Q9Y4L5 304 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
CAST-224ENST00000508830 MRPL33O75394 65 aaKnown RBP13.46□□□□□ -0.25
CAST-224ENST00000508830 FGF12P61328 243 aa13.46□□□□□ -0.25
CAST-224ENST00000508830 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
CAST-224ENST00000508830 CHD3Q12873 2000 aaKnown RBP13.46□□□□□ -0.26
CAST-224ENST00000508830 TUSC2O75896 110 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 FABP1P07148 127 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 JMJD7P0C870 316 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 SMIM6P0DI80 62 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 ID3Q02535 119 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 TRA2AQ13595 282 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■■□□□ 12.9
CAST-224ENST00000508830 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 Q6ZRM9 215 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 Q6ZS49 121 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 VASH2Q86V25 355 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 HLA-CQ95604 372 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 SPIN2AQ99865 258 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 SPIN2BQ9BPZ2 258 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 LAMA5O15230 3695 aa13.46□□□□□ -0.26
CAST-224ENST00000508830 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
CAST-224ENST00000508830 YIF1AO95070 293 aa13.45□□□□□ -0.26
CAST-224ENST00000508830 UCP1P25874 307 aa13.45□□□□□ -0.26
CAST-224ENST00000508830 VAMP2P63027 116 aa13.45□□□□□ -0.26
CAST-224ENST00000508830 TMEM267Q0VDI3 215 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms