RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 Q9N2K0 584 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 PARP11Q9NR21 331 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 AMDHD2Q9Y303 409 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 PIGBOS1A0A0B4J2F0 54 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 C3orf85A0A1B0GTC6 90 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MBD3L4A6NDZ8 208 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MBD3L3A6NE82 208 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MBD3L5A6NJ08 208 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 F8W036 122 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 ABCD4O14678 606 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MPPED1O15442 326 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 WISP2O76076 250 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CDS2O95674 445 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 NAPSAO96009 420 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CRYABP02511 175 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 P2RY1P47900 373 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CAV2P51636 162 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 F2RL1P55085 397 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 RND3P61587 244 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 EIF2S3LQ2VIR3 472 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MBD3L2Q8NHZ7 208 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 GLYATL2Q8WU03 294 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 GTF3AQ92664 365 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CARHSP1Q9Y2V2 147 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 POMT1Q9Y6A1 747 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 MED12LQ86YW9 2145 aa9.87□□□□□ -0.83
PRPF40B-203ENST00000508736 CACNA1GO43497 2377 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 DUXBA0A1W2PPF3 345 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF205O95201 554 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 SNAPINO95295 136 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 GLAP06280 429 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 RCC1P18754 421 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 IL32P24001 234 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 S100GP29377 79 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 GNG3P63215 75 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 GNMTQ14749 295 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 DAZAP2Q15038 168 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 MST1LQ2TV78 715 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 IGSF11Q5DX21 431 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 C10orf91Q5T1B1 145 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 C17orf78Q8N4C9 275 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 OR11L1Q8NGX0 322 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 OR5P3Q8WZ94 311 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 SEC11CQ9BY50 192 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 TMEM222Q9H0R3 208 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 HRH4Q9H3N8 390 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 RHOFQ9HBH0 211 aa9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 FAM212BQ9NTI7 297 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 UBE2J1Q9Y385 318 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-203ENST00000508736 SHANK1Q9Y566 2161 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 TRDCB7Z8K6 153 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 MKRN2OSH3BPM6 223 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 GPR31O00270 319 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 NUPL2O15504 423 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 PRKACAP17612 351 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 PVALBP20472 110 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 AKR1C2P52895 323 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 AKR1C1Q04828 323 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SPIN3Q5JUX0 258 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 MEX3BQ6ZN04 569 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 Q6ZPA2 131 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 BATF2Q8N1L9 274 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 RBMXL3Q8N7X1 1067 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SLC35G3Q8N808 338 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 CNEP1R1Q8N9A8 125 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 CLRN3Q8NCR9 226 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 OR4A4PQ8NGN8 299 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 ABHD14BQ96IU4 210 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 PKIBQ9C010 78 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 FGF23Q9GZV9 251 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 OBP2BQ9NPH6 170 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 UQCC1Q9NVA1 299 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 MTCH1Q9NZJ7 389 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 ATP23Q9Y6H3 246 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 ATMQ13315 3056 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SMPD2O60906 423 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 WDR1O75083 606 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 FBXO24O75426 580 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 TNFSF13O75888 250 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 LYZL6O75951 148 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 CGAP01215 116 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 IGKV3-15P01624 115 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SEC11BP0C7V7 166 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 CBR1P16152 277 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 TUBG1P23258 451 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 LPAR6P43657 344 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 IL24Q13007 206 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 P2RY6Q15077 328 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 KRTCAP3Q53RY4 240 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 VWA1Q6PCB0 445 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 HAGHLQ6PII5 290 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 LDLRAD3Q86YD5 345 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 ZNF695Q8IW36 515 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 CMTM1Q8IZ96 169 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SECTM1Q8WVN6 248 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 TP53RKQ96S44 253 aa9.85□□□□□ -0.83
PRPF40B-203ENST00000508736 SMIM3Q9BZL3 60 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms