RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 PRSS3P35030 304 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 NPY4RP50391 375 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 DGCR2P98153 550 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 MAPK1IP1LQ8NDC0 245 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 OR4K15Q8NH41 348 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 H1FXQ92522 213 aaKnown RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 SDHCQ99643 169 aaPredicted RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 SRRQ9GZT4 340 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 RABL2AQ9UBK7 228 aaPredicted RBP11.73□□□□□ -0.53
RNF4-208ENST00000507247 RABL2BQ9UNT1 228 aa11.73□□□□□ -0.53
RNF4-208ENST00000507247 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 CTDSPLO15194 276 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 FCGR3AP08637 254 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNF4-208ENST00000507247 ZNF45Q02386 682 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 ZNF273Q14593 569 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 PYDC2Q56P42 97 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 ZNF880Q6PDB4 577 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 C5orf24Q7Z6I8 188 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 TRAPPC6BQ86SZ2 158 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 OR52I2Q8NH67 350 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 GPX8Q8TED1 209 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 MAFIPQ8WZ33 124 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
RNF4-208ENST00000507247 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
RNF4-208ENST00000507247 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
RNF4-208ENST00000507247 IGKV1D-8A0A087WSZ0 117 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 TRBV6-6A0A0A6YYG2 114 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 FUOMA2VDF0 154 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 GPR37O15354 613 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 FCER2P06734 321 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 LPLP06858 475 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 RCC1P18754 421 aaPredicted RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 GLP1RP43220 463 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 RPL31P62899 125 aaKnown RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 LCN2P80188 198 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 MRPS15P82914 257 aaKnown RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 PITPNAQ00169 270 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 GVQW1Q8N7I0 195 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 SETD6Q8TBK2 473 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 SMIM4Q8WVI0 70 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 S100ZQ8WXG8 99 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 RIMS4Q9H426 269 aaPredicted RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 Q9N2K0 584 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 RPUSD1Q9UJJ7 312 aaKnown RBP11.71□□□□□ -0.53
RNF4-208ENST00000507247 TRAPPC2LQ9UL33 140 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
RNF4-208ENST00000507247 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 GABARAPH6UMI1 98 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 SULT1C2O00338 296 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
RNF4-208ENST00000507247 LANCL1O43813 399 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 DTYMKP23919 212 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
RNF4-208ENST00000507247 PAX2Q02962 417 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 CR1LQ2VPA4 569 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 TMEM200BQ69YZ2 307 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
RNF4-208ENST00000507247 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 DACT3Q96B18 629 aaPredicted RBP11.7□□□□□ -0.54
RNF4-208ENST00000507247 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 OCSTAMPQ9BR26 566 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 SCPEP1Q9HB40 452 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 KLK11Q9UBX7 282 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
RNF4-208ENST00000507247 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
RNF4-208ENST00000507247 LOC105371242A0A075B767 164 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 H7C1Q1 480 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 J3QRK9 145 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 FOXH1O75593 365 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 ECDO95905 644 aaPredicted RBP11.69□□□□□ -0.54
RNF4-208ENST00000507247 HEXAP06865 529 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 CGB3P0DN86 165 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 CGB7P0DN87 165 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 CCL3L1P16619 93 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 MEF2CQ06413 473 aaPredicted RBP11.69□□□□□ -0.54
RNF4-208ENST00000507247 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 C17orf58Q2M2W7 97 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 Q8N402 240 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 UBALD1Q8TB05 177 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 FCAMRQ8WWV6 532 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 CORO2AQ92828 525 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 SNAPC3Q92966 411 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 TSC22D3Q99576 134 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
RNF4-208ENST00000507247 WDR12Q9GZL7 423 aaKnown RBP11.69□□□□□ -0.54
RNF4-208ENST00000507247 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms