RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FAM27D1Q5T7N8 215 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 SLC35E4Q6ICL7 350 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 UNQ9370/PRO34162Q6UXP9 181 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 LYPD6Q86Y78 171 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 MRGPRDQ8TDS7 321 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 MRPS24Q96EL2 167 aaKnown RBP12.55□□□□□ -0.4
MED28-204ENST00000506409 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 UQCC2Q9BRT2 126 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 ZNF286AQ9HBT8 521 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 TCF19Q9Y242 345 aa12.55□□□□□ -0.4
MED28-204ENST00000506409 A0A087X0M5 115 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 A0A1B0GX30 115 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 TMEM30CPA0ZSE6 113 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 TOR1AO14656 332 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 CHST1O43916 411 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 IGLV1-47P01700 117 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 CGB3P0DN86 165 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 CGB7P0DN87 165 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 NFYBP25208 207 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 GABRA5P31644 462 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 VHLP40337 213 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 PROK1P58294 105 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 RBM48Q5RL73 367 aaKnown RBP12.54□□□□□ -0.4
MED28-204ENST00000506409 CEACAM19Q7Z692 300 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 PHYHIPQ92561 330 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 TMEM203Q969S6 136 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 NPFFR1Q9GZQ6 430 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 BANF2Q9H503 90 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 SPACA1Q9HBV2 294 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 PITPNC1Q9UKF7 332 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 BLOC1S6Q9UL45 172 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 NBEAL1Q6ZS30 2694 aa12.54□□□□□ -0.4
MED28-204ENST00000506409 F2RL2O00254 374 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 SC5DO75845 299 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 IL1AP01583 271 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 MGMTP16455 207 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 JUNBP17275 347 aaPredicted RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 SSTR5P35346 364 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 DYNLT3P51808 116 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 GP2P55259 537 aaKnown RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 MLLT11Q13015 90 aaPredicted RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 TPBGQ13641 420 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 HLA-DRB5Q30154 266 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 HSD17B12Q53GQ0 312 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 PRR31Q5SQ13 230 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 TMEM104Q8NE00 496 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 CITED1Q99966 193 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 SELENOIQ9C0D9 397 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 RANBP3Q9H6Z4 567 aaPredicted RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 ISYNA1Q9NPH2 558 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 IDI2-AS1Q9NZ38 188 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 RCC2Q9P258 522 aaKnown RBP12.53□□□□□ -0.4
MED28-204ENST00000506409 GHRLQ9UBU3 117 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 FBLN5Q9UBX5 448 aa12.53□□□□□ -0.4
MED28-204ENST00000506409 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 A6NDX4 124 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 SRMP19623 302 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 CEACAM3P40198 252 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 MAP2K4P45985 399 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 PRRX1P54821 245 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 KRTAP10-3P60369 221 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 RBM39Q14498 530 aaKnown RBP12.52□□□□□ -0.41
MED28-204ENST00000506409 LTC4SQ16873 150 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 UTF1Q5T230 341 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 CCBE1Q6UXH8 406 aaPredicted RBP12.52□□□□□ -0.41
MED28-204ENST00000506409 LRRTM1Q86UE6 522 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 OR9G1Q8NH87 305 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 FAM46BQ96A09 425 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 CST11Q9H112 138 aa12.52□□□□□ -0.41
MED28-204ENST00000506409 FAM90A10PA6NDY2 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A18PA6NE21 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A16PA6NEW6 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A20PA6NIJ5 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A7PA6NKC0 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A22PA8MWA6 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A12PA8MX19 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A5PA8MXJ8 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A23PA8MXZ1 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 MCRIP1C9JLW8 97 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 UCHL1P09936 223 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A15PP0C7V4 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A13PP0C7W8 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 FAM90A14PP0C7W9 464 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms