RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CD300LDQ6UXZ3 194 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OR6V1Q8N148 313 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 C6orf223Q8N319 242 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 MINDY2Q8NBR6 621 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OR51L1Q8NGJ5 315 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OR8S1Q8NH09 359 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CASTOR1Q8WTX7 329 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 HPSE2Q8WWQ2 592 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 PYDC1Q8WXC3 89 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 ASB17Q8WXJ9 295 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RFKQ969G6 155 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 SLC7A6OSQ96CW6 309 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 SLAMF6Q96DU3 332 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CENPNQ96H22 339 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 PGAM5Q96HS1 289 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 TSSK2Q96PF2 358 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 KCNJ15Q99712 375 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 C9orf16Q9BUW7 83 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 GABARAPL3Q9BY60 117 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CADM1Q9BY67 442 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 MROQ9BYG7 248 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OR10A2Q9H208 303 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 RGCCQ9H4X1 137 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 SLA2Q9H6Q3 261 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 NIPAL2Q9H841 368 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF286AQ9HBT8 521 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 SRA1Q9HD15 236 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CENPMQ9NSP4 180 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 TVP23BQ9NYZ1 205 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 DNAJC27Q9NZQ0 273 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 H2AFY2Q9P0M6 372 aaPredicted RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 CYB5R1Q9UHQ9 305 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 OAZ3Q9UMX2 235 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 B9D1Q9UPM9 204 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 MRPS28Q9Y2Q9 187 aaKnown RBP2.42□□□□□ -2.02
TCOF1-208ENST00000506063 N6AMT1Q9Y5N5 214 aa2.42□□□□□ -2.02
TCOF1-208ENST00000506063 A0A087X0M5 115 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 A0A1B0GX30 115 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 IRGMA1A4Y4 181 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FAM172BPA6NC97 362 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF850A8MQ14 1090 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF670-ZNF695F2Z2N8 137 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 LOC110117498-PIK3R3F6TDL0 507 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 K7N7A8 449 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DCTN6O00399 190 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DLGAP1O14490 977 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 EI24O14681 340 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DEFB4AO15263 64 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 TGOLN2O43493 480 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RRP9O43818 475 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 MPZL2O60487 215 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SELENOFO60613 162 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF737O75373 536 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 GATBO75879 557 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 IGKV1D-33P01593 117 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 IGKV1-33P01594 117 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 IGHV3-11P01762 117 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 KRT8P05787 483 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CLUP10909 449 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SLC2A1P11166 492 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 EDN2P20800 178 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 VDAC1P21796 283 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 GLRA1P23415 457 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FCGR2BP31994 310 aaPredicted RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DDOSTP39656 456 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 OPRL1P41146 370 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 RPS27P42677 84 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ALDH3A2P51648 485 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 PRKXP51817 358 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CAPZA1P52907 286 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CRISP1P54107 249 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF121P58317 390 aaPredicted RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 MED21Q13503 144 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 DYRK1AQ13627 763 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 GALEQ14376 348 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 GINS1Q14691 196 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 KPNB1Q14974 876 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 PTGES3Q15185 160 aaKnown RBP2.41□□□□□ -2.02
TCOF1-208ENST00000506063 TEX30Q5JUR7 227 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 BCL2L15Q5TBC7 163 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SLX4IPQ5VYV7 408 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FAHD1Q6P587 224 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 LYPD4Q6UWN0 246 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 Q6ZTC4 211 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 FAM57BQ71RH2 274 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SLC16A9Q7RTY1 509 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CPOQ8IVL8 374 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SLC35F2Q8IXU6 374 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 HS3ST5Q8IZT8 346 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ABHD12Q8N2K0 398 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 PQLC1Q8N2U9 271 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF676Q8N7Q3 588 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 SETD9Q8NE22 299 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF555Q8NEP9 628 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 CSNK2A3Q8NEV1 391 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 OR10H4Q8NGA5 316 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 OR8J1Q8NGP2 316 aa2.41□□□□□ -2.02
TCOF1-208ENST00000506063 OR2K2Q8NGT1 345 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms