RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 OR10J5Q8NHC4 309 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 GLYATL2Q8WU03 294 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 MSI2Q96DH6 328 aaKnown RBP8.32□□□□□ -1.08
COL1A1-210ENST00000504289 AKR1E2Q96JD6 320 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 TOLLIPQ9H0E2 274 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 OPN3Q9H1Y3 402 aaPredicted RBP8.32□□□□□ -1.08
COL1A1-210ENST00000504289 MBNL3Q9NUK0 354 aaKnown RBP8.32□□□□□ -1.08
COL1A1-210ENST00000504289 ELOVL5Q9NYP7 299 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 PFDN2Q9UHV9 154 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 OR2W1Q9Y3N9 320 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 SESN1Q9Y6P5 492 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 FREM2Q5SZK8 3169 aa8.32□□□□□ -1.08
COL1A1-210ENST00000504289 C3orf85A0A1B0GTC6 90 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CLEC18AA5D8T8 446 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 E5RGE8 158 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 F5H0A9 414 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 H0YIZ8 118 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 SLC33A1O00400 549 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 PRRG2O14669 202 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 TIMM8AO60220 97 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 DEDDO75618 318 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 RHBDL1O75783 438 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 WISP2O76076 250 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 OR2H2O95918 312 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 IGHV3-13P01766 116 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CRYAAP02489 173 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 PDGFAP04085 211 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 GAPDHP04406 335 aaKnown RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 HOXB5P09067 269 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 OR5AC1P0C628 307 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 SLC25A6P12236 298 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF44P15621 663 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 GLRXP35754 106 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 MPV17P39210 176 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CD200P41217 278 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 FXYD4P59646 89 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 IGSF11Q5DX21 431 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 SLC35E4Q6ICL7 350 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 TRAT1Q6PIZ9 186 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 PCSK4Q6UW60 755 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 HSD17B13Q7Z5P4 300 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 MRGPRGQ86SM5 289 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 COMMD7Q86VX2 200 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 H1FOOQ8IZA3 346 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 FAM71E2Q8N5Q1 922 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CLEC18CQ8NCF0 446 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 ZBTB34Q8NCN2 500 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 BVESQ8NE79 360 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 OR5T2Q8NGG2 359 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 DYRK2Q92630 601 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CYYR1Q96J86 154 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 HS3ST6Q96QI5 342 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF471Q9BX82 626 aaPredicted RBP8.31□□□□□ -1.08
COL1A1-210ENST00000504289 OR51B6Q9H340 312 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 TAAR3PQ9P1P4 343 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 NSG2Q9Y328 171 aa8.31□□□□□ -1.08
COL1A1-210ENST00000504289 PRRC2CQ9Y520 2896 aaKnown RBP8.3□□□□□ -1.08
COL1A1-210ENST00000504289 A0A1W2PR80 420 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 hCG_1807616A0A1W2PRN6 198 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 TMEM30CPA0ZSE6 113 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 H0Y980 276 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
COL1A1-210ENST00000504289 K7ENP7 123 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 CDIPTO14735 213 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 MLNRO43193 412 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 AGFG2O95081 481 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 SPDEFO95238 335 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 SCTP09683 121 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 MMP9P14780 707 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 UCP1P25874 307 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 RAB32Q13637 225 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 SNTB1Q13884 538 aaKnown RBP8.3□□□□□ -1.08
COL1A1-210ENST00000504289 HERPUD1Q15011 391 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 PDCD1Q15116 288 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 HMGN3Q15651 99 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 TSC22D1Q15714 1073 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 SMIM21Q3B7S5 101 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 C6orf183Q5T699 404 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF474Q6S9Z5 364 aaPredicted RBP8.3□□□□□ -1.08
COL1A1-210ENST00000504289 ALKAL2Q6UX46 152 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 BAP18Q8IXM2 172 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 OR5D13Q8NGL4 314 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 RDH5Q92781 318 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 SLC5A7Q9GZV3 580 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 NCOR1P1Q9H4R4 102 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 FAM212BQ9NTI7 297 aaPredicted RBP8.3□□□□□ -1.08
COL1A1-210ENST00000504289 KCNIP1Q9NZI2 227 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF835Q9Y2P0 537 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 MSRB2Q9Y3D2 182 aa8.3□□□□□ -1.08
COL1A1-210ENST00000504289 IGLV3-9A0A075B6K5 115 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 IGKV1-6A0A0C4DH72 117 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 A8MXE2 369 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 KRBOX1C9JBD0 128 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 HS3ST1O14792 307 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 BET1O15155 118 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms