RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CYTL1Q9NRR1 136 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 PLA2G3Q9NZ20 509 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF230Q9UIE0 474 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ADAM29Q9UKF5 820 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 MED13Q9UHV7 2174 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 DOCK9Q9BZ29 2069 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ARFGEF3Q5TH69 2177 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 C5orf42Q9H799 3197 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 C2CD3Q4AC94 2353 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A096LPE4 126 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 IGHV3-15A0A0B4J1V0 119 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 A0A1W2PPZ6 126 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM129A0AVI4 362 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ZNF727A8MUV8 499 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 PPP5D1E7EU14 171 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 GPR137BO60478 399 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 LRP3O75074 770 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 PMS2P2O95744 297 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 SCGB1A1P11684 91 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 LTBRP36941 435 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 NKX2-1P43699 371 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 RAB7AP51149 207 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 RPL32P62910 135 aaKnown RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 IL10RAQ13651 578 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 LDLRAD2Q5SZI1 272 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 STPG1Q5TH74 334 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 CCDC144NLQ6NUI1 221 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 CD200R1LQ6Q8B3 271 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 C16orf47Q6ZP98 133 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 DTX1Q86Y01 620 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 SLC22A24Q8N4F4 322 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 SPICQ8N5J4 248 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 C11orf42Q8N5U0 333 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 OR13H1Q8NG92 308 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 TERB2Q8NHR7 220 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 RHBDD1Q8TEB9 315 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 RGP1Q92546 391 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 MS4A6EQ96DS6 147 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 BMFQ96LC9 184 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 SLC25A21Q9BQT8 299 aaPredicted RBP3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 ABHD6Q9BV23 337 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 PIGMQ9H3S5 423 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 INPP5EQ9NRR6 644 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 NDUFB11Q9NX14 153 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 JPT1Q9UK76 154 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 PPP1R3CQ9UQK1 317 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 HS3ST2Q9Y278 367 aa3.22□□□□□ -1.89
PCDH11X-208ENST00000504220 COL4A3Q01955 1670 aa3.21□□□□□ -1.89
PCDH11X-208ENST00000504220 KIAA1549Q9HCM3 1950 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 DHRS7CA6NNS2 312 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 F8WDY8 70 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ST8SIA3O43173 380 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SSSCA1O60232 199 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 MT-CO2P00403 227 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 IGHV3-13P01766 116 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 IGHV3-7P01780 117 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 RPL12P30050 165 aaKnown RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GCH1P30793 250 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC6A8P48029 635 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PCBP4P57723 403 aaKnown RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CCL7P80098 99 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SSBP2P81877 361 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SRSF4Q08170 494 aaKnown RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GGTA1PQ4G0N0 100 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 HES3Q5TGS1 186 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR2T2Q6IF00 324 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PRR27Q6MZM9 219 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ACOT7LQ6ZUV0 252 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR2W3Q7Z3T1 314 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GALNT16Q8N428 558 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4F17Q8NGA8 305 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4D9Q8NGE8 314 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR10W1Q8NGF6 305 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 LHX4Q969G2 390 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 UHRF2Q96PU4 802 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4F4Q96R69 305 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CABLES2Q9BTV7 478 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C6orf106Q9H6K1 298 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C20orf141Q9NUB4 165 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 B4GALT7Q9UBV7 327 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 AK3Q9UIJ7 227 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 LAMP3Q9UQV4 416 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PIGLQ9Y2B2 252 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 COX11Q9Y6N1 276 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PTPN13Q12923 2485 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 USF3Q68DE3 2245 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 A0A1B0GU03 582 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C3orf80F5H4A9 247 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 F8VVB4 439 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 F8VWA3 439 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SNAI2O43623 268 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZFAND5O76080 213 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CER1O95813 267 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CTSDP07339 412 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GIPP09681 153 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SMIM10L1P0DMW3 83 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CPEP16870 476 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 MDKP21741 143 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms