RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 YRDCQ86U90 279 aaKnown RBP12.85□□□□□ -0.35
SNF8-203ENST00000504000 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 OR10D3Q8NH80 312 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 TOLLIPQ9H0E2 274 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
SNF8-203ENST00000504000 TMEM242Q9NWH2 141 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 IGKV3D-15A0A087WSY6 115 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 A0A1B0GU03 582 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 CDRT15L2A8MXV6 281 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 TMEM50AO95807 157 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 S100GP29377 79 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
SNF8-203ENST00000504000 ASCL1P50553 236 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 PRSS12P56730 875 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 UBE2KP61086 200 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 HERPUD1Q15011 391 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 CEACAM21Q3KPI0 293 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 ZNF468Q5VIY5 522 aaPredicted RBP12.85□□□□□ -0.35
SNF8-203ENST00000504000 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 IFI44Q8TCB0 444 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 RNF150Q9ULK6 438 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 WSB1Q9Y6I7 421 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 VCANP13611 3396 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 LRP5LA4QPB2 252 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
SNF8-203ENST00000504000 TGOLN2O43493 480 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 CHST1O43916 411 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 FBP1P09467 338 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 SCTP09683 121 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 OMGP23515 440 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 GLIPR1P48060 266 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
SNF8-203ENST00000504000 PAX9P55771 341 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
SNF8-203ENST00000504000 PDCD1Q15116 288 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 HLA-BQ31612 363 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
SNF8-203ENST00000504000 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 CPEB3Q8NE35 698 aaKnown RBP12.84□□□□□ -0.35
SNF8-203ENST00000504000 DMRT1Q9Y5R6 373 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
SNF8-203ENST00000504000 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 LRRC3CA6NJW4 275 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 WRBO00258 174 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 BCL3P20749 454 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 IGFBP4P22692 258 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 F2RP25116 425 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 FOLR3P41439 243 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.36
SNF8-203ENST00000504000 DLK1P80370 383 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 ZFP36L1Q07352 338 aaKnown RBP12.83□□□□□ -0.36
SNF8-203ENST00000504000 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
SNF8-203ENST00000504000 PRDX4Q13162 271 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 STX12Q86Y82 276 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 SLAMF9Q96A28 289 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 OPA3Q9H6K4 179 aa12.83□□□□□ -0.36
SNF8-203ENST00000504000 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 MED19A0JLT2 244 aaPredicted RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 TXNL1O43396 289 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 SS18L1O75177 396 aaPredicted RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 PGLYRP1O75594 196 aaPredicted RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 CST7O76096 145 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 F10P00742 488 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 RPL23AP62750 156 aaKnown RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 HAGHQ16775 308 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 ZNF880Q6PDB4 577 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 ZDHHC23Q8IYP9 409 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 TDHQ8IZJ6 230 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 OR5A2Q8NGI9 324 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 GGACTQ9BVM4 153 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 MAGT1Q9H0U3 335 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 TNRC6BQ9UPQ9 1833 aaKnown RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 LOC102723971A0A1B0GUV8 181 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 KIAA1324LA8MWY0 1029 aaPredicted RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 NPIPB11E5RHQ5 1161 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 EPHA1P21709 976 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 HAAOP46952 286 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 GFRA1P56159 465 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 PMS2P11Q13670 270 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 PCSK4Q6UW60 755 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 LSM10Q969L4 123 aaKnown RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 PSMG3Q9BT73 122 aaPredicted RBP12.82□□□□□ -0.36
SNF8-203ENST00000504000 TINAGQ9UJW2 476 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 PILRBQ9UKJ0 227 aa12.82□□□□□ -0.36
SNF8-203ENST00000504000 IGKV1-6A0A0C4DH72 117 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 A0A1B0GV50 99 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 TRAPPC2LH3BP13 241 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms