RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ANOS1P23352 680 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 HTR1DP28221 377 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 MAGEA12P43365 314 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 KIR2DS2P43631 304 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 CXCL12P48061 93 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SPINT3P49223 89 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 THBS3P49746 956 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 TCL1AP56279 114 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 RAB38P57729 211 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 PSME3P61289 254 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 CACNG7P62955 275 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPS21P63220 83 aaKnown RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SRPXP78539 464 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ATP6AP1Q15904 470 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 BAIAP2L2Q6UXY1 529 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF620Q6ZNG0 422 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 LYG2Q86SG7 212 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPP1R27Q86WC6 154 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC30A8Q8IWU4 369 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 RIMKLAQ8IXN7 391 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 CPNE9Q8IYJ1 553 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR6V1Q8N148 313 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 GAPTQ8N292 157 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 PNKDQ8N490 385 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZADH2Q8N4Q0 377 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR13G1Q8NGZ3 307 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 FLVCR1-AS1Q8TAF5 88 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 WFDC5Q8TCV5 224 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 L3HYPDHQ96EM0 354 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPP3R2Q96LZ3 170 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 Q96MT0 163 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SDHCQ99643 169 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 TLNRD1Q9H1K6 362 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 C20orf85Q9H1P6 137 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 MS4A6AQ9H2W1 248 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 MAP1LC3AQ9H492 121 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 EXOSC4Q9NPD3 245 aaKnown RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 FBXO6Q9NRD1 293 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SPANXB1Q9NS25 103 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 C19orf12Q9NSK7 152 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM9Q9P0T7 183 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 TP53TG1Q9Y2A0 90 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 HEBP2Q9Y5Z4 205 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ARL5AQ9Y689 179 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 CHD5Q8TDI0 1954 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ABCA7Q8IZY2 2146 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SPAG17Q6Q759 2223 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CABIN1Q9Y6J0 2220 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 PCDH15Q96QU1 1955 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 NUP205Q92621 2012 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 TNRC6BQ9UPQ9 1833 aaKnown RBP3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGLV1-36A0A0B4J1U3 117 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 DAPL1A0PJW8 107 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM172BPA6NC97 362 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 SMIM9A6NGZ8 99 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPL37AP8A6NKH3 93 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 K7N7A8 449 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 PSMD12O00232 456 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 KMOO15229 486 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CTNSO60931 367 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CRLF1O75462 422 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 SUPT3HO75486 399 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 FOXH1O75593 365 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 SEMG1P04279 462 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR8U8P0C7N1 319 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CBR1P16152 277 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 AQP1P29972 269 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CCKARP32238 428 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CD70P32970 193 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 MYCNOSP40205 109 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 VDAC2P45880 294 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 RIDAP52758 137 aaKnown RBP3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 FHL1Q13642 323 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 C22orf39Q6P5X5 142 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 XKRXQ6PP77 449 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 NUP37Q8NFH4 326 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR11L1Q8NGX0 322 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR10Z1Q8NGY1 313 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF519Q8TB69 540 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 LRRC29Q8WV35 223 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 EEF1AKMT1Q8WVE0 214 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 ROPN1LQ96C74 230 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 DDIT4LQ96D03 193 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 DHRS9Q9BPW9 319 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 VCXQ9H320 206 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM100Q9NV29 134 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 OPTCQ9UBM4 332 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 CD84Q9UIB8 345 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 MGAQ8IWI9 3026 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 APC2O95996 2303 aa3.36□□□□□ -1.87
HMGB1P21-201ENST00000502313 ATMQ13315 3056 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 HELZ2Q9BYK8 2649 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 CENPVL3A0A0U1RRI6 287 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 A0A1W2PRG6 482 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 FOXI3A8MTJ6 420 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms