RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CLN6Q9NWW5 311 aa12.05□□□□□ -0.48
HDAC6-236ENST00000498808 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
HDAC6-236ENST00000498808 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
HDAC6-236ENST00000498808 ZNF736B4DX44 427 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-236ENST00000498808 HSPB6O14558 160 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 DEGS1O15121 323 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 PRKYO43930 277 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 MOSP00540 346 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
HDAC6-236ENST00000498808 SSTR5P35346 364 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 F2RL1P55085 397 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 FAM98BQ52LJ0 330 aaKnown RBP12.04□□□□□ -0.48
HDAC6-236ENST00000498808 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 SLC16A12Q6ZSM3 486 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 HAPLN4Q86UW8 402 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 RDH10Q8IZV5 341 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 PRSS35Q8N3Z0 413 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 OR5D18Q8NGL1 313 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 ADI1Q9BV57 179 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 KRT84Q9NSB2 600 aa12.04□□□□□ -0.48
HDAC6-236ENST00000498808 PCLOQ9Y6V0 5065 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 G3V318 75 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 CST1P01037 141 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 IGLV1-40P01703 118 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 PRKACBP22694 351 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 CD1BP29016 333 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 C21orf33P30042 268 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-236ENST00000498808 HAGHQ16775 308 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 UTS2BQ765I0 119 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 OPALINQ96PE5 141 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 TPSG1Q9NRR2 321 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 ZNF107Q9UII5 783 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-236ENST00000498808 WSB1Q9Y6I7 421 aa12.03□□□□□ -0.48
HDAC6-236ENST00000498808 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 H0YJX3 145 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 M0R129 80 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 KRT8P05787 483 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 OR8U9P0C7N5 309 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 PRKACGP22612 351 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 KIR3DL2P43630 455 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 RAB9AP51151 201 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 RSBN1Q5VWQ0 802 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-236ENST00000498808 SGPP2Q8IWX5 399 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 OR10A7Q8NGE5 316 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 OR8H1Q8NGG4 311 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-236ENST00000498808 SPSB1Q96BD6 273 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 TBX5Q99593 518 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 KIAA1456Q9P272 454 aa12.02□□□□□ -0.49
HDAC6-236ENST00000498808 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 LINC01619G3V211 115 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 IFNA6P05013 189 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 RAP2AP10114 183 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-236ENST00000498808 MTNR1BP49286 362 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 MS4A2Q01362 244 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 PAN3Q58A45 887 aaKnown RBP12.01□□□□□ -0.49
HDAC6-236ENST00000498808 AADACL4Q5VUY2 407 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 ELAC2Q9BQ52 826 aaKnown RBP12.01□□□□□ -0.49
HDAC6-236ENST00000498808 TOLLIPQ9H0E2 274 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 RHOFQ9HBH0 211 aa12.01□□□□□ -0.49
HDAC6-236ENST00000498808 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 A0A087WW49 117 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 METTL15A6NJ78 407 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 ATP6V0E1O15342 81 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 HSPA12AO43301 675 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 UBCP0CG48 685 aaKnown RBP12□□□□□ -0.49
HDAC6-236ENST00000498808 DHFR2Q86XF0 187 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 LINC00311Q8N616 119 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
HDAC6-236ENST00000498808 FGGYQ96C11 551 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 OR4C12Q96R67 309 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 BARHL1Q9BZE3 327 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 NEK6Q9HC98 313 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 ARL8BQ9NVJ2 186 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 CHCHD3Q9NX63 227 aaKnown RBP12□□□□□ -0.49
HDAC6-236ENST00000498808 TAGLN3Q9UI15 199 aa12□□□□□ -0.49
HDAC6-236ENST00000498808 A0A1W2PQL4 384 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-236ENST00000498808 VHLP40337 213 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 CRISP1P54107 249 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 PITPNAQ00169 270 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 PAX5Q02548 391 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 GALEQ14376 348 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 NXNL2Q5VZ03 156 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 EME1Q96AY2 570 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 ZCCHC4Q9H5U6 513 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms