RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 A0A1W2PPH5 198 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 NPIPB11E5RHQ5 1161 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 K7N7A8 449 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 SDCBPO00560 298 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 GPR37O15354 613 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 RGS11O94810 467 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 HLA-AP01891 365 aaKnown RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 CTSDP07339 412 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 OR4E1P0C645 316 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF728P0DKX0 622 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 GRNP28799 593 aaKnown RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ERP29P30040 261 aaKnown RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 IL2RGP31785 369 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 SRPXP78539 464 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ATPAF1Q5TC12 328 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF880Q6PDB4 577 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 MUC20Q8N307 709 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 SPICQ8N5J4 248 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 OR13C8Q8NGS7 320 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ANGPTL6Q8NI99 470 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF431Q8TF32 576 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 CCL17Q92583 94 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 RAB39BQ96DA2 213 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 SDSLQ96GA7 329 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 SPOCK3Q9BQ16 436 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 NEURL2Q9BR09 285 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 HDHD3Q9BSH5 251 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-210ENST00000498259 IL36RNQ9UBH0 155 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 GPR132Q9UNW8 380 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 ACACBO00763 2458 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 PKD1L2Q7Z442 2459 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 TPRP12270 2363 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 TRGV10A0A0A0MS01 117 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 A0A0B4J2A0 478 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 TEX13DA0A0J9YY54 714 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 FAM221AA4D161 298 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 A6NNC1 897 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM178BH3BS89 294 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 WNT9BO14905 357 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 BET1O15155 118 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 DUS4LO95620 317 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 PPYP01298 95 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 AKR1C4P17516 323 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 IGFBP2P18065 325 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 ANXA7P20073 488 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 VAMP1P23763 118 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 NPY4RP50391 375 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 CYCSP99999 105 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 SNTB1Q13884 538 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 ATXN7L3Q14CW9 347 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 ZFP69Q49AA0 526 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 LRRC10Q5BKY1 277 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 STUMQ69YW2 141 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 MEX3BQ6ZN04 569 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 NLRC3Q7RTR2 1065 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 LYG2Q86SG7 212 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 GLCCI1Q86VQ1 547 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 C12orf45Q8N5I9 185 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 MARCH1Q8TCQ1 289 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 EDARADDQ8WWZ3 215 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 MAFIPQ8WZ33 124 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 RAB1CQ92928 201 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 MOB3AQ96BX8 217 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 HS3ST6Q96QI5 342 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 TRAF4Q9BUZ4 470 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 RANBP3Q9H6Z4 567 aaPredicted RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 SHPKQ9UHJ6 478 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF222Q9UK12 451 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 FLVCR2Q9UPI3 526 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 BOLA1Q9Y3E2 137 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 RBM7Q9Y580 266 aaKnown RBP7.09□□□□□ -1.27
SF3A1-210ENST00000498259 BSNQ9UPA5 3926 aa7.09□□□□□ -1.27
SF3A1-210ENST00000498259 IGKV1D-17A0A075B6S4 117 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 TRBV6-7A0A0A0MS04 114 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 hADV38S2A0JD32 116 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 ODAMA1E959 279 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 RNF212BA8MTL3 300 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 SIGLEC5O15389 551 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 NDUFB3O43676 98 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 PSPNO60542 156 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CYB5R3P00387 301 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-210ENST00000498259 IFNA2P01563 188 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 IFNA21P01568 189 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 SULT1A3P0DMM9 295 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 SULT1A4P0DMN0 295 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 C4BPBP20851 252 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CD34P28906 385 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 RBMXP38159 391 aaKnown RBP7.08□□□□□ -1.28
SF3A1-210ENST00000498259 OR3A1P47881 315 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 LUMP51884 338 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-210ENST00000498259 P2RX3P56373 397 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 TMEM33P57088 247 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 RAP2BP61225 183 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 HTD2P86397 168 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 MEF2CQ06413 473 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-210ENST00000498259 AESQ08117 197 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms