RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 HSF4Q9ULV5 492 aa9.8□□□□□ -0.84
CUX1-210ENST00000497815 AUP1Q9Y679 476 aa9.8□□□□□ -0.84
CUX1-210ENST00000497815 ABCA2Q9BZC7 2435 aa9.8□□□□□ -0.84
CUX1-210ENST00000497815 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 TRAV18A0A075B6X5 111 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 A0A1W2PPH5 198 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 FAM25AB3EWG3 89 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 FAM25CB3EWG5 89 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 FAM25GB3EWG6 89 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 TOX4O94842 621 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 AVPP01185 164 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 MT-ND4P03905 459 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 HIST1H1DP16402 221 aaKnown RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 CDK2P24941 298 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 DLX1P56177 255 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 ERVFRD-1P60508 538 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 PAX8Q06710 450 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 DYNC1I2Q13409 638 aaKnown RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 CDNFQ49AH0 187 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 IL17RELQ6ZVW7 336 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 OR13A1Q8NGR1 328 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 MCFD2Q8NI22 146 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 SETD6Q8TBK2 473 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 MRGPRDQ8TDS7 321 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 S100A16Q96FQ6 103 aaKnown RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 WDFY2Q96P53 400 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 HDHD3Q9BSH5 251 aaPredicted RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 SLIRPQ9GZT3 109 aaKnown RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 C6orf62Q9GZU0 229 aaPredicted RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 ABCG5Q9H222 651 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 DIABLOQ9NR28 239 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 ELF5Q9UKW6 265 aaPredicted RBP9.79□□□□□ -0.84
CUX1-210ENST00000497815 TRAPPC2LQ9UL33 140 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 KCNK7Q9Y2U2 307 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 LINC00312Q9Y6C7 94 aa9.79□□□□□ -0.84
CUX1-210ENST00000497815 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 A6NHS1 94 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 J3QLI3 93 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 MFNGO00587 321 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 CTDSP2O14595 271 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 SCGNO76038 276 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 CD3GP09693 182 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 ZNF728P0DKX0 622 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 ELK1P19419 428 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 MRPS15P82914 257 aaKnown RBP9.78□□□□□ -0.84
CUX1-210ENST00000497815 ARFRP1Q13795 201 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 FAM120AOSQ5T036 256 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 VMO1Q7Z5L0 202 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 LAX1Q8IWV1 398 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 PDZD9Q8IXQ8 264 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 Q8N7P7 452 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 ZNF565Q8N9K5 539 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 UBALD1Q8TB05 177 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 MRPL30Q8TCC3 161 aaKnown RBP9.78□□□□□ -0.84
CUX1-210ENST00000497815 CMSS1Q9BQ75 279 aaKnown RBP9.78□□□□□ -0.84
CUX1-210ENST00000497815 SIRPDQ9H106 197 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 SIRT7Q9NRC8 400 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 OR6C3Q9NZP0 311 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 OPN4Q9UHM6 478 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 UBE2J1Q9Y385 318 aaPredicted RBP9.78□□□□□ -0.84
CUX1-210ENST00000497815 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
CUX1-210ENST00000497815 ZNF469Q96JG9 3925 aaPredicted RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 TMEM235A6NFC5 223 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 M0R1W7 72 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 CA11O75493 328 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 APOA1P02647 267 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 PTHLHP12272 177 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 RCC1P18754 421 aaPredicted RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 OMGP23515 440 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 SSTR5P35346 364 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 DLX6P56179 175 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 PAX5Q02548 391 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 LTC4SQ16873 150 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 TMEM69Q5SWH9 247 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 ZNF782Q6ZMW2 699 aaPredicted RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 PRR18Q8N4B5 295 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 KIR3DL3Q8N743 410 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 RFESDQ8TAC1 157 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 TBX15Q96SF7 602 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 MIXL1Q9H2W2 232 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 C12orf4Q9NQ89 552 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 CALYQ9NYX4 217 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 MRPS7Q9Y2R9 242 aaKnown RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 KPTNQ9Y664 436 aa9.77□□□□□ -0.85
CUX1-210ENST00000497815 YLPM1P49750 1951 aaKnown RBP9.77□□□□□ -0.85
CUX1-210ENST00000497815 MAST4O15021 2626 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 MALRD1Q5VYJ5 2156 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 A0A0A6YYH2 397 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 hCG_1809904A0A1W2PP81 198 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 A0A1W2PPE2 198 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 A0A1W2PR64 198 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 A0A1W2PRV1 198 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 FAM172BPA6NC97 362 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 A6NJ64 397 aa9.76□□□□□ -0.85
CUX1-210ENST00000497815 ZNF729A6NN14 1252 aaPredicted RBP9.76□□□□□ -0.85
CUX1-210ENST00000497815 SERPINE3A8MV23 424 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms