RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LHX4Q969G2 390 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 VAMP8Q9BV40 100 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 CTDSP1Q9GZU7 261 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 Q9N2K0 584 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 PDGFBP01127 241 aaPredicted RBP11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 GALNSP34059 522 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 TAS2R30P59541 319 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 HIST1H3AP68431 136 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF385AQ96PM9 386 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF737O75373 536 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 GAGE1Q13065 139 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 DOK3Q7L591 496 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ATP5SQ99766 215 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 OR51B6Q9H340 312 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 CISD1Q9NZ45 108 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF732B4DXR9 585 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 CA3P07451 260 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 HNF1AP20823 631 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 MMDQ15546 238 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 H1FNTQ75WM6 255 aaPredicted RBP11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 FAM89BQ8N5H3 189 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 OR8G5Q8NG78 346 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 HLA-CQ95604 372 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 SPOCK3Q9BQ16 436 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF160Q9HCG1 818 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 EGR1P18146 543 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 GCH1P30793 250 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 TCF23Q7RTU1 214 aa11.32□□□□□ -0.6
GAPVD1-220ENST00000497580 ANKUB1A6NFN9 424 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 HSPB6O14558 160 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 HRASP01112 189 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 IFNA1P01562 189 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SAPCD1Q5SSQ6 148 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 COL5A1-AS1Q5SY13 56 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SLC39A9Q9NUM3 307 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 CARD18P57730 90 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SLC37A2Q8TED4 501 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 GATAD1Q8WUU5 269 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 ZCCHC14Q8WYQ9 949 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 WNT16Q9UBV4 365 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 MPPED1O15442 326 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 SEMA4FO95754 770 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 GAB4Q2WGN9 574 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 Q6ZSR6 202 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 ERASQ7Z444 233 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 MIEN1Q9BRT3 115 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 ADH1BP00325 375 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 FGF14Q92915 247 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 TXN2Q99757 166 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 ANGPTL4Q9BY76 406 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 MANBALQ9NQG1 85 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 PRR19A6NJB7 356 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 H3BMH7 237 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 GUSBP08236 651 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 CDKN1AP38936 164 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 KRTDAPP60985 99 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 SHHQ15465 462 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms