RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 INSIG2Q9Y5U4 225 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 DSCAML1Q8TD84 2053 aa16.53■□□□□ 0.24
CTSD-206ENST00000497544 RAB27BO00194 218 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 PAX2Q02962 417 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 MOGAT2Q3SYC2 334 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 UBE2NLQ5JXB2 153 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 TMEM200BQ69YZ2 307 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 SLC35E4Q6ICL7 350 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 COQ2Q96H96 371 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 ARHGAP5-AS1Q96IT6 56 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 SULT4A1Q9BR01 284 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 DIABLOQ9NR28 239 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 BATF3Q9NR55 127 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 KIF25Q9UIL4 384 aa16.52■□□□□ 0.24
CTSD-206ENST00000497544 MEIKINA0A087WXM9 373 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 TMEM30CPA0ZSE6 113 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 FOXI3A8MTJ6 420 aaPredicted RBP16.51■□□□□ 0.23
CTSD-206ENST00000497544 CA11O75493 328 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 KRTAP24-1Q3LI83 254 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 RSBN1Q5VWQ0 802 aaPredicted RBP16.51■□□□□ 0.23
CTSD-206ENST00000497544 TRAPPC6BQ86SZ2 158 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 CMTM4Q8IZR5 234 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 SLC25A38Q96DW6 304 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 CMTM3Q96MX0 182 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 DCUN1D5Q9BTE7 237 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 PECRQ9BY49 303 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 ABCG5Q9H222 651 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 NCOR1P1Q9H4R4 102 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 C7orf69Q9H7B7 122 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 ONECUT1Q9UBC0 465 aa16.51■□□□□ 0.23
CTSD-206ENST00000497544 A0A075B6Q4 140 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 TRGV10A0A0A0MS01 117 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 ODAMA1E959 279 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 A6NHS1 94 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 ARF6P62330 175 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 PAX8Q06710 450 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 ARL6IP1Q15041 203 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 ZNF565Q8N9K5 539 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 DACT3Q96B18 629 aaPredicted RBP16.5■□□□□ 0.23
CTSD-206ENST00000497544 OR6C3Q9NZP0 311 aa16.5■□□□□ 0.23
CTSD-206ENST00000497544 A0A0A6YYH2 397 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 MEX3AA1L020 520 aaKnown RBP16.49■□□□□ 0.23
CTSD-206ENST00000497544 A6NJ64 397 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 A8MV72 311 aaPredicted RBP16.49■□□□□ 0.23
CTSD-206ENST00000497544 FAM25AB3EWG3 89 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 FAM25CB3EWG5 89 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 FAM25GB3EWG6 89 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 J3QLI3 93 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 HPGDSO60760 199 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 TGP01266 2768 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 MT-ND4P03905 459 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 PAX5Q02548 391 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 PLAC9Q5JTB6 97 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 FOXB2Q5VYV0 432 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 ZNF497Q6ZNH5 498 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 TRAPPC2LQ9UL33 140 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 AUP1Q9Y679 476 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 LINC00312Q9Y6C7 94 aa16.49■□□□□ 0.23
CTSD-206ENST00000497544 hCG_1809904A0A1W2PP81 198 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 A0A1W2PPE2 198 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 A0A1W2PR64 198 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 A0A1W2PRV1 198 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 RGS5O15539 181 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 APOA1P02647 267 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 HIST1H1DP16402 221 aaKnown RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 GNB3P16520 340 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 MRPS15P82914 257 aaKnown RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 ZNF273Q14593 569 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 CDNFQ49AH0 187 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 METTL11BQ5VVY1 283 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 OR4K15Q8NH41 348 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 MCFD2Q8NI22 146 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 CCDC107Q8WV48 283 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 DYRK2Q92630 601 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 CORO2AQ92828 525 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 CMSS1Q9BQ75 279 aaKnown RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 SLIRPQ9GZT3 109 aaKnown RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 ZMAT3Q9HA38 289 aaKnown RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 CHMP1AQ9HD42 196 aaPredicted RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 AK3Q9UIJ7 227 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 UBE2J1Q9Y385 318 aaPredicted RBP16.48■□□□□ 0.23
CTSD-206ENST00000497544 KPTNQ9Y664 436 aa16.48■□□□□ 0.23
CTSD-206ENST00000497544 TRAV18A0A075B6X5 111 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 SERPINE3A8MV23 424 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 M0R1W7 72 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 CTDSP2O14595 271 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 EIF4EP06730 217 aaKnown RBP16.47■□□□□ 0.23
CTSD-206ENST00000497544 CD3GP09693 182 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 ZNF728P0DKX0 622 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 CCL3L1P16619 93 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 GZMHP20718 246 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 CDK2P24941 298 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 GLP1RP43220 463 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 ARFRP1Q13795 201 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 CR1LQ2VPA4 569 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 RTN4RL2Q86UN3 420 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 CYYR1Q96J86 154 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 ZNF714Q96N38 554 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 WDFY2Q96P53 400 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms