RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IGHG3P01860 377 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 SFTPBP07988 381 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 SNRNP70P08621 437 aaKnown RBP9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 B4GALT1P15291 398 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 TNFSF10P50591 281 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 F2RL1P55085 397 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 S100A10P60903 97 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 HGFACQ04756 655 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 GLIPR1L1Q6UWM5 242 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 ASCL4Q6XD76 172 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 ZDHHC22Q8N966 263 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 C1QTNF5Q9BXJ0 243 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 BANF2Q9H503 90 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 LPAR3Q9UBY5 353 aa9.99□□□□□ -0.81
SNRNP200-208ENST00000497539 SDCBPO00560 298 aaPredicted RBP9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 TM4SF5O14894 197 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 OR3A4PP47883 348 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 RAB32Q13637 225 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 SNAI3Q3KNW1 292 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 CLEC18BQ6UXF7 455 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ZNF573Q86YE8 665 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ZNF101Q8IZC7 436 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 PNLDC1Q8NA58 520 aaKnown RBP9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 WDYHV1Q96HA8 205 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 C5orf66Q9H5L9 145 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 CUL9Q8IWT3 2517 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ZNF587BE7ETH6 402 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 SOCS1O15524 211 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 DBHP09172 617 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 RAB5AP20339 215 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 SLC6A9P48067 706 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 OR8B8Q15620 311 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 UBE2V2Q15819 145 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ANKRD55Q3KP44 614 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 Q5PR19 223 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ATP1A1-AS1Q5TC04 95 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 TMEM230Q96A57 120 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 ISOC2Q96AB3 205 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 RNF2Q99496 336 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 C20orf24Q9BUV8 137 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 SMIM3Q9BZL3 60 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 PLSCR4Q9NRQ2 329 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 GPR173Q9NS66 373 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 SLC7A10Q9NS82 523 aa9.98□□□□□ -0.81
SNRNP200-208ENST00000497539 A0A0A6YYD4 124 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 hCG_38984A0A1B0GV85 526 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 XRCC2O43543 280 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 SS18L1O75177 396 aaPredicted RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 CEACAM1P13688 526 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 FGF7P21781 194 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 GABRR1P24046 479 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 KLF3P57682 345 aaPredicted RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 RTP5Q14D33 572 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 KISS1Q15726 138 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 OR56B1Q8NGI3 324 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 REEP6Q96HR9 211 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 RCC1LQ96I51 464 aaKnown RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 SMIM8Q96KF7 97 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 PIGLQ9Y2B2 252 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 MPIG6BO95866 241 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 FCGR2AP12318 317 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 GLRA1P23415 457 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 MAS1LP35410 378 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 ARG2P78540 354 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 ARL6IP1Q15041 203 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 CNN3Q15417 329 aaKnown RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 OR2A2Q6IF42 318 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 DHRS11Q6UWP2 260 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 MYPOPQ86VE0 399 aaPredicted RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 TUSC5Q8IXB3 177 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 TERB2Q8NHR7 220 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 FGFBP3Q8TAT2 258 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 MED12Q93074 2177 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 APH1AQ96BI3 265 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 LIPGQ9Y5X9 500 aa9.97□□□□□ -0.81
SNRNP200-208ENST00000497539 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 TRGV5A0A0B4J1U4 118 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 MFNGO00587 321 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 HIST1H1DP16402 221 aaKnown RBP9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 FAHP16930 419 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 CPT2P23786 658 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 ACKR3P25106 362 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 GLP1RP43220 463 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 CAV2P51636 162 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 ARF1P84077 181 aaKnown RBP9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 TMEM128Q5BJH2 165 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 PLAC9Q5JTB6 97 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 SULT4A1Q9BR01 284 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 URM1Q9BTM9 101 aaKnown RBP9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 ST6GALNAC5Q9BVH7 336 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 TMEM59Q9BXS4 323 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms