RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 FAM90A15PP0C7V4 464 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 FAM90A14PP0C7W9 464 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PGA5P0DJD9 388 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 GTF2F2P13984 249 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 HIST1H1DP16402 221 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 BCL3P20749 454 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SERPINA2P20848 420 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CPT2P23786 658 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CHATP28329 748 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PRSS3P35030 304 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CFHR2P36980 270 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CD200P41217 278 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 HAAOP46952 286 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SRP9P49458 86 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 VEGFCP49767 419 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 KLF3P57682 345 aaPredicted RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 DEFA1P59665 94 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 DEFA3P59666 94 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 FGF12P61328 243 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 RPS23P62266 143 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SSBP1Q04837 148 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ZNF154Q13106 437 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SNTB1Q13884 538 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 RSU1Q15404 277 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ADIPOQQ15848 244 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 TAF9Q16594 264 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PNLIPRP3Q17RR3 467 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 TRIQKQ629K1 86 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CCDC144NLQ6NUI1 221 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 Q6ZTK2 550 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 NRARPQ7Z6K4 114 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 MKXQ8IYA7 352 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 OSR2Q8N2R0 312 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SPERTQ8NA61 448 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SCCPDHQ8NBX0 429 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 DUSP18Q8NEJ0 188 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 OR13G1Q8NGZ3 307 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 LILRB1Q8NHL6 650 aaPredicted RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CA5BP1Q8WTZ4 195 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 DEDD2Q8WXF8 326 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 GTF3AQ92664 365 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 SLAMF9Q96A28 289 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 NEDD4LQ96PU5 975 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 NRIP2Q9BQI9 281 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 URM1Q9BTM9 101 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ADAT1Q9BUB4 502 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PECRQ9BY49 303 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 RHOFQ9HBH0 211 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 HES4Q9HCC6 221 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 NGBQ9NPG2 151 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 KCNJ16Q9NPI9 418 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PCDHB16Q9NRJ7 776 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 CA10Q9NS85 328 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 RBFOX1Q9NWB1 397 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 RCC2Q9P258 522 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ZNF107Q9UII5 783 aaPredicted RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 HSF4Q9ULV5 492 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 PLCE1Q9P212 2302 aa4.47□□□□□ -1.69
GGPS1-208ENST00000497327 ANKHD1Q8IWZ3 2542 aaKnown RBP4.47□□□□□ -1.69
GGPS1-208ENST00000497327 DIDO1Q9BTC0 2240 aaKnown RBP4.46□□□□□ -1.69
GGPS1-208ENST00000497327 ROS1P08922 2347 aa4.46□□□□□ -1.69
GGPS1-208ENST00000497327 LINC00854A0A1B0GVQ3 168 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.46□□□□□ -1.7
GGPS1-208ENST00000497327 SERPINE3A8MV23 424 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 E7EQL1 145 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 F5H5P2 479 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 CDIPTO14735 213 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 GEMIN2O14893 280 aaKnown RBP4.46□□□□□ -1.7
GGPS1-208ENST00000497327 LYRM1O43325 122 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 ZG16O60844 167 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 RBBP9O75884 186 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 CLDN14O95500 239 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 IGHV1-46P01743 117 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 CD74P04233 296 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 PRB1P04280 392 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 GNB3P16520 340 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 IGFBP2P18065 325 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 BLVRBP30043 206 aaPredicted RBP4.46□□□□□ -1.7
GGPS1-208ENST00000497327 SLC6A1P30531 599 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 PMELP40967 661 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 RBM11P57052 281 aaKnown RBP4.46□□□□□ -1.7
GGPS1-208ENST00000497327 IL13RA2Q14627 380 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 ARL6IP1Q15041 203 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 OR8G1Q15617 311 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 EFNB3Q15768 340 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 MPPED2Q15777 294 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 TRIM16LQ309B1 348 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 PIGYQ3MUY2 71 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 SPRNQ5BIV9 151 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 BEX5Q5H9J7 111 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 OLFML2AQ68BL7 652 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 Q6P435 159 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 CCBE1Q6UXH8 406 aaPredicted RBP4.46□□□□□ -1.7
GGPS1-208ENST00000497327 WDR82Q6UXN9 313 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 ZNF843Q8N446 348 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 TOMM5Q8N4H5 51 aa4.46□□□□□ -1.7
GGPS1-208ENST00000497327 TMEM229BQ8NBD8 167 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms