RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 IFITM5A6NNB3 132 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 F5H0A9 414 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 TSPAN4O14817 238 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 PHYHO14832 338 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 TRIAP1O43715 76 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ENSAO43768 121 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 GMDSO60547 372 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SELENOFO60613 162 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 TSC22D2O75157 780 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SPDEFO95238 335 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 S100A6P06703 90 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 CD14P08571 375 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NMBP08949 121 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 CST2P09228 141 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 IGHV4-38-2P0DP08 117 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 CALCBP10092 127 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 IRF2P14316 349 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF20P17024 532 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SRMP19623 302 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 LAP3P28838 519 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 AQP2P41181 271 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NAA10P41227 235 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SRP9P49458 86 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF133P52736 654 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 BPIFB3P59826 476 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 RAP1BP61224 184 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 RPL15P61313 204 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SEC61A1P61619 476 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 TSPAN5P62079 268 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 RAP1AP62834 184 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 PSG4Q00888 419 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 GK2Q14410 553 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZMYND11Q15326 602 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 RBMS2Q15434 407 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 KLF17Q5JT82 389 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 FAM27BQ5VT28 67 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NHLRC1Q6VVB1 395 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 GLDNQ6ZMI3 551 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 FAM122BQ7Z309 247 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 FAM220AQ7Z4H9 259 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 KRT77Q7Z794 578 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 SVBPQ8N300 66 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 FTMTQ8N4E7 242 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 OR6M1Q8NGM8 313 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 MOSPD2Q8NHP6 518 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF671Q8TAW3 534 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 LGALS14Q8TCE9 139 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 CCDC107Q8WV48 283 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ITLN1Q8WWA0 313 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NABP1Q96AH0 204 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 C1orf147Q96MC9 270 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 DERL3Q96Q80 235 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 OR2V2Q96R30 315 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NMNAT3Q96T66 252 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 PDCD10Q9BUL8 212 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 MRPL13Q9BYD1 178 aaKnown RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 NOX4Q9NPH5 578 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 BIN3Q9NQY0 253 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 AURKAIP1Q9NWT8 199 aaPredicted RBP4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 MIOXQ9UGB7 285 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 POLR1DQ9Y2S0 133 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 PCNX3Q9H6A9 2034 aa4.79□□□□□ -1.64
CACNA1C-229ENST00000496818 FREM1Q5H8C1 2179 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 LOC100509620A0A075B734 347 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 TRBV5-7A0A0A0MS05 114 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 A0A0A6YYH2 397 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 GAGE12BA1L429 117 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 BTBD17A6NE02 478 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 A6NJ64 397 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 ACOD1A6NK06 481 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 SRRM5B3KS81 715 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 MCRIP1C9JLW8 97 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 TRAPPC2LH3BP13 241 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 TMEM178BH3BS89 294 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 SULT1C2O00338 296 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF593O00488 134 aaPredicted RBP4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 XKRYO14609 159 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 PIN1P1O15428 100 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 SGCEO43556 437 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 ZNF254O75437 659 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 OR2F2O95006 317 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 NDUFB6O95139 128 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 CSF1P09603 554 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 CD3GP09693 182 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 COX5BP10606 129 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 MGMTP16455 207 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 KITLGP21583 273 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 OMGP23515 440 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 CDKN2AP42771 156 aaKnown RBP4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 CENPAP49450 140 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 HCCSP53701 268 aa4.78□□□□□ -1.64
CACNA1C-229ENST00000496818 RPL27P61353 136 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms