RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 CLEC2AQ6UVW9 174 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 OR4D11Q8NGI4 311 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 SAP25Q8TEE9 199 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 GDF15Q99988 308 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 STARD10Q9Y365 291 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 INSIG2Q9Y5U4 225 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 MFNGO00587 321 aa11.52□□□□□ -0.56
PTPRF-215ENST00000496447 NTN1O95631 604 aa11.52□□□□□ -0.56
PTPRF-215ENST00000496447 OR5C1Q8NGR4 320 aa11.52□□□□□ -0.56
PTPRF-215ENST00000496447 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.56
PTPRF-215ENST00000496447 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.56
PTPRF-215ENST00000496447 C7orf66A4D0T2 115 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 SEMA7AO75326 666 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 PNRC1Q12796 327 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-215ENST00000496447 NSUN5P2Q63ZY6 315 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 DYRK2Q92630 601 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 SIRT7Q9NRC8 400 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 LPAR3Q9UBY5 353 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 MPC2O95563 127 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 DHRS2Q13268 280 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-215ENST00000496447 ZNF79Q15937 498 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 ATG2BQ96BY7 2078 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 TCF21O43680 179 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 OR10J1P30954 320 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 TMEM251Q8N6I4 163 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 KCNK15Q9H427 330 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 K7ERU9 68 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 GALR1P47211 349 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 PLPPR5Q32ZL2 321 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 GVQW1Q8N7I0 195 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 OR1B1Q8NGR6 318 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 ZNF385AQ96PM9 386 aaKnown RBP11.52□□□□□ -0.57
PTPRF-215ENST00000496447 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
PTPRF-215ENST00000496447 PPIAL4EA0A075B759 164 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 ANKRD20A5PA0PJZ0 165 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 C9orf170A2RU37 121 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 PPIAL4DF5H284 164 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 GNG7O60262 68 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 SNCGO76070 127 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 PPIAL4FP0DN26 164 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 FGF5P12034 268 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 PPIAL4AQ9Y536 164 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 ZNF716A6NP11 495 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 B4DEV8 164 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 COL24A1Q17RW2 1714 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-215ENST00000496447 NHLRC2Q8NBF2 726 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 OR5A2Q8NGI9 324 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 LNP1A1A4G5 178 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 MPTX1A8MV57 137 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 C1QAP02745 245 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 SULT1A1P50225 295 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 COL4A5P29400 1685 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 FAM24AA6NFZ4 105 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 CDRT15L2A8MXV6 281 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 COL5A1-AS1Q5SY13 56 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
PTPRF-215ENST00000496447 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 FAM214BQ7L5A3 538 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 OR2J1Q9GZK6 312 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 OPN4Q9UHM6 478 aa11.51□□□□□ -0.57
PTPRF-215ENST00000496447 A0A0J9YW62 118 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 GAMTQ14353 236 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 TSPO2Q5TGU0 170 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 TBC1D26Q86UD7 250 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 ANXA10Q9UJ72 324 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 FFAR1O14842 300 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 DDTP30046 118 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 GGTLC2Q14390 218 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 AHRRA9YTQ3 701 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 NMBP08949 121 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 FCARP24071 287 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 NHLH2Q02577 135 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 SEZ6L2Q6UXD5 910 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 MYPOPQ86VE0 399 aaPredicted RBP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 PLXNB2O15031 1838 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 POLR2GP62487 172 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 RPS4XP62701 263 aaKnown RBP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 RAB32Q13637 225 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 RAB33BQ9H082 229 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 SPAG17Q6Q759 2223 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 P2RY6Q15077 328 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 Q6ZN92 141 aa11.5□□□□□ -0.57
PTPRF-215ENST00000496447 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
PTPRF-215ENST00000496447 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms