RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
CBX4-204ENST00000495122 GSG1LQ6UXU4 331 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 SGPP2Q8IWX5 399 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 SLC38A6Q8IZM9 456 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 POC1AQ8NBT0 407 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 SCCPDHQ8NBX0 429 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 FAM222BQ8WU58 562 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 MOB3AQ96BX8 217 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 SYT3Q9BQG1 590 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 NRIP2Q9BQI9 281 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 NMES1Q9C002 83 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 OR51B6Q9H340 312 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
CBX4-204ENST00000495122 SLC23A1Q9UHI7 598 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 GLS2Q9UI32 602 aa13.78□□□□□ -0.2
CBX4-204ENST00000495122 IGKV1D-8A0A087WSZ0 117 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 TUBAL3A6NHL2 446 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 A6NNC1 897 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 A8MXE2 369 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 IFNA7P01567 189 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 S100A1P23297 94 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 HERV-K104P61576 105 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 SORDQ00796 357 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 ZNF345Q14585 488 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 ZNF146Q15072 292 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 TSC22D1Q15714 1073 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 DCAF12L2Q5VW00 463 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 ZNF880Q6PDB4 577 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 CCDC71LQ8N9Z2 235 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 MAFIPQ8WZ33 124 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 NINJ1Q92982 152 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 PDCD10Q9BUL8 212 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 HES4Q9HCC6 221 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 C1orf123Q9NWV4 160 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 KCNIP3Q9Y2W7 256 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 ATP23Q9Y6H3 246 aa13.77□□□□□ -0.21
CBX4-204ENST00000495122 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.21
CBX4-204ENST00000495122 DSCAMO60469 2012 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 FLNAP21333 2647 aaKnown RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 A0A0D9SG52 128 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 TRDCB7Z8K6 153 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 EEF1E1-BLOC1S5C9J1V9 151 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 TIMM8AO60220 97 aaPredicted RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 SIX6O95475 246 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 IFNA2P01563 188 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 CRYAAP02489 173 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 MPV17P39210 176 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 KCNJ3P48549 501 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 RIPPLY3P57055 190 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 SNRPD2P62316 118 aaKnown RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 ZNF154Q13106 437 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 RGS7BPQ6MZT1 257 aaPredicted RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 GAPTQ8N292 157 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 NEK7Q8TDX7 302 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 CASTOR1Q8WTX7 329 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 GALNT14Q96FL9 552 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 DPCDQ9BVM2 203 aaPredicted RBP13.76□□□□□ -0.21
CBX4-204ENST00000495122 SUCNR1Q9BXA5 334 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 FXYD6Q9H0Q3 95 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 VPS13CQ709C8 3753 aa13.76□□□□□ -0.21
CBX4-204ENST00000495122 NPIPB11E5RHQ5 1161 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 F8VVB4 439 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 F8VWA3 439 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 SH2D1BO14796 132 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 DEGS1O15121 323 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 OR2F2O95006 317 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 PTBP3O95758 552 aaKnown RBP13.75□□□□□ -0.21
CBX4-204ENST00000495122 TK1P04183 234 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 ZNF250P15622 560 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 S100A11P31949 105 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 GLRXP35754 106 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 ERVS71-1P61550 626 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 SUPT4H1P63272 117 aaKnown RBP13.75□□□□□ -0.21
CBX4-204ENST00000495122 OR2F1Q13607 317 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 ABCA11PQ4W5N1 156 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 Q6P435 159 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 TEX261Q6UWH6 196 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 WDR86Q86TI4 376 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 OR4A4PQ8NGN8 299 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 OR10Z1Q8NGY1 313 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 WDR13Q9H1Z4 485 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 LIME1Q9H400 295 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 HEXA-AS1Q9H8Q6 139 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 RASL12Q9NYN1 266 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 ZNF581Q9P0T4 197 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 PCDHB10Q9UN67 800 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 U3KQ87 197 aa13.75□□□□□ -0.21
CBX4-204ENST00000495122 NXPH2O95156 264 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 IGHV3-13P01766 116 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 PET100P0DJ07 73 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 FCGR2CP31995 323 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 CD200P41217 278 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 RND3P61587 244 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms