RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CD177Q8N6Q3 437 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 LRTM2Q8N967 370 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ADAD2Q8NCV1 583 aaKnown RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 OR4A4PQ8NGN8 299 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 LINC01560Q8TB33 94 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 FAM216AQ8WUB2 273 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ITLN1Q8WWA0 313 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 MAFIPQ8WZ33 124 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 RDH5Q92781 318 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 PIK3IP1Q96FE7 263 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 LRRC46Q96FV0 321 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 PLPPR2Q96GM1 343 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ZNF486Q96H40 463 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 SNX22Q96L94 193 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 SYT3Q9BQG1 590 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 RSRP1Q9BUV0 290 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 TMPRSS13Q9BYE2 586 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ZNF436Q9C0F3 470 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 DNTTIP1Q9H147 329 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 LINC00574Q9H8X3 128 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ZNF701Q9NV72 531 aaPredicted RBP5.69□□□□□ -1.5
MSH5-217ENST00000494458 C1orf123Q9NWV4 160 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 ING3Q9NXR8 418 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 EHFQ9NZC4 300 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 RNF7Q9UBF6 113 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 MGAT4CQ9UBM8 478 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 GLS2Q9UI32 602 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 CFAP46Q8IYW2 2715 aa5.69□□□□□ -1.5
MSH5-217ENST00000494458 FAM221AA4D161 298 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CRYM-AS1A6NIL9 109 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 RFPL4AA6NLU0 287 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 RFPL4AL1F8VTS6 287 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 K7N7A8 449 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 HS3ST1O14792 307 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CLDN14O95500 239 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 SFT2D2O95562 160 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CD8AP01732 235 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 RLN1P04808 185 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CD3EP07766 207 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 SCTP09683 121 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ANXA3P12429 323 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 MUC1P15941 1255 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 RCC1P18754 421 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 TNFSF4P23510 183 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 PRDX2P32119 198 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 H2BFSP57053 126 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ARPC4P59998 168 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 RAP2BP61225 183 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 TSPAN5P62079 268 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 MRPS15P82914 257 aaKnown RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 TNFAIP6P98066 277 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 CD83Q01151 205 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CBX3Q13185 183 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 MSMO1Q15800 293 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 PAN3Q58A45 887 aaKnown RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 IGSF11Q5DX21 431 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 XP32Q5T750 250 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 STUMQ69YW2 141 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 LAMTOR1Q6IAA8 161 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 LPCAT3Q6P1A2 487 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ZNF788Q6ZQV5 615 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 NLRC3Q7RTR2 1065 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 NOXA1Q86UR1 476 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 H1FOOQ8IZA3 346 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 OR52B4Q8NGK2 314 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ZFAND1Q8TCF1 268 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 CA5BP1Q8WTZ4 195 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 LRRC29Q8WV35 223 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 COQ2Q96H96 371 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 LURAP1Q96LR2 239 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 HYLS1Q96M11 299 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 ZNF2Q9BSG1 426 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 BEX2Q9BXY8 128 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 FXYD6Q9H0Q3 95 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 FAM234AQ9H0X4 552 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 MS4A5Q9H3V2 200 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 RANBP3Q9H6Z4 567 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 BEX1Q9HBH7 125 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 UFSP2Q9NUQ7 469 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 FBXO9Q9UK97 447 aaPredicted RBP5.68□□□□□ -1.5
MSH5-217ENST00000494458 MAB21L2Q9Y586 359 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 USP24Q9UPU5 2620 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
MSH5-217ENST00000494458 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 HCFC1P51610 2035 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 TMEM30CPA0ZSE6 113 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 TUBAL3A6NHL2 446 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 FAM90A27PA6NNH2 459 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 C15orf65H3BRN8 121 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 TMEM178BH3BS89 294 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 MGST3O14880 152 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 SPRY3O43610 288 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 GOSR1O95249 250 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 PLAUP00749 431 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 PPYP01298 95 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 IGLV2-14P01704 120 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms