RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SLC7A10Q9NS82 523 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 PIPOXQ9P0Z9 390 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 GNG7O60262 68 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 GYPAP02724 150 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 ASAH2BP0C7U1 165 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 HTR1DP28221 377 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 PMELP40967 661 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 FGF8P55075 233 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-207ENST00000494090 RPS4XP62701 263 aaKnown RBP16.77■□□□□ 0.28
COL27A1-207ENST00000494090 GABRA6Q16445 453 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 AWAT1Q58HT5 328 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 GAPTQ8N292 157 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 PARD6AQ9NPB6 346 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 SLC2A9Q9NRM0 540 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 COA4Q9NYJ1 87 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 TOX4O94842 621 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 ZNF250P15622 560 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 KIR3DL2P43630 455 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 HOGA1Q86XE5 327 aa16.77■□□□□ 0.28
COL27A1-207ENST00000494090 ADAT3Q96EY9 351 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-207ENST00000494090 CDS2O95674 445 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 NGFRP08138 427 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 PRSS3P2Q8NHM4 247 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 BLNKQ8WV28 456 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 FSCN3Q9NQT6 498 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 KLHDC2Q9Y2U9 406 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 DUXBA0A1W2PPF3 345 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 CDIPTO14735 213 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 PMCHP20382 165 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 ACP1P24666 158 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 RTP5Q14D33 572 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 DOLPP1Q86YN1 238 aa16.77■□□□□ 0.27
COL27A1-207ENST00000494090 HIST1H3AP68431 136 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 TOMM20LQ6UXN7 152 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 TINAGQ9UJW2 476 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 LIPGQ9Y5X9 500 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 DSPPQ9NZW4 1301 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 SEMA7AO75326 666 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 ORM2P19652 201 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 ANKRD55Q3KP44 614 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 C19orf57Q0VDD7 668 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 VAMP3Q15836 100 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 PMS2CLQ68D20 193 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 PERPQ96FX8 193 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 TRAF4Q9BUZ4 470 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-207ENST00000494090 ELF5Q9UKW6 265 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-207ENST00000494090 DXOO77932 396 aaKnown RBP16.76■□□□□ 0.27
COL27A1-207ENST00000494090 SPINK9Q5DT21 86 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 PRR7Q8TB68 274 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 TMEM171Q8WVE6 324 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 UBTD1Q9HAC8 227 aa16.76■□□□□ 0.27
COL27A1-207ENST00000494090 AP4M1O00189 453 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 STXBP6Q8NFX7 210 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 OR4A4PQ8NGN8 299 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 VSIG4Q9Y279 399 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 A0A1W2PPC1 479 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 Q8WTZ3 238 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 Q9N2K0 584 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 TNFSF18Q9UNG2 199 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 FSTP19883 344 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 BSXQ3C1V8 233 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 RNASEKQ6P5S7 137 aaKnown RBP16.75■□□□□ 0.27
COL27A1-207ENST00000494090 DTD1Q8TEA8 209 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 CCL28Q9NRJ3 127 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 B4DEV8 164 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 GREM1O60565 184 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 HNRNPA3P51991 378 aaKnown RBP16.75■□□□□ 0.27
COL27A1-207ENST00000494090 PARP11Q9NR21 331 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 LYRM2Q9NU23 88 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-207ENST00000494090 PILRAQ9UKJ1 303 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 KLK13Q9UKR3 277 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 TRPM6Q9BX84 2022 aa16.75■□□□□ 0.27
COL27A1-207ENST00000494090 FAM157AC9JC47 383 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 RPL30P62888 115 aaKnown RBP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 FUT5Q11128 374 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 SPNS3Q6ZMD2 512 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 FLYWCH2Q96CP2 140 aaKnown RBP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 INSIG2Q9Y5U4 225 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 MRPS18BQ9Y676 258 aaKnown RBP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 SPAARA0A1B0GVQ0 90 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 CCKARP32238 428 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 ZNF154Q13106 437 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 GTF2H5Q6ZYL4 71 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 OR1B1Q8NGR6 318 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 UCN2Q96RP3 112 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 MEX3AA1L020 520 aaKnown RBP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 FCN1O00602 326 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 TTRP02766 147 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 IGHV4-34P06331 123 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 MEOX2P50222 304 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 EWSR1Q01844 656 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 TMEM97Q5BJF2 176 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 FAM219AQ8IW50 185 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 COL4A5P29400 1685 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 DGAT2L7PQ6IED9 249 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 GPX7Q96SL4 187 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-207ENST00000494090 CLN8Q9UBY8 286 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms