RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 DMRT1Q9Y5R6 373 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 IGLV3-32A0A0A0MS00 114 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 DUXBA0A1W2PPF3 345 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MS4A18H0YCH9 400 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ZFAND5O76080 213 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MPIG6BO95866 241 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 GPANK1O95872 356 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 CCL3P10147 92 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF44P15621 663 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 CRYGSP22914 178 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 CHATP28329 748 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 FCGR2CP31995 323 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ARHGDIBP52566 201 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 AKR1C2P52895 323 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 SNU13P55769 128 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 UCP3P55916 312 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 SNRPEP62304 92 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 LSM6P62312 80 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 CSNK2A1P68400 391 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 AKR1C1Q04828 323 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 RBM39Q14498 530 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF266Q14584 549 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 GUK1Q16774 197 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 IAH1Q2TAA2 248 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MS4A18Q3C1V0 323 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 WIPI1Q5MNZ9 446 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 FAM185AQ8N0U4 392 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 CSNK2A3Q8NEV1 391 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 OR13C9Q8NGT0 318 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 C11orf40Q8WZ69 217 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 RASL10BQ96S79 203 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 GAL3ST1Q99999 423 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MRPL13Q9BYD1 178 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 OR8D2Q9GZM6 311 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 PRDM14Q9GZV8 571 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC35B3Q9H1N7 401 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF703Q9H7S9 590 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 SDHAF3Q9NRP4 125 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 TMEM160Q9NX00 188 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 EHFQ9NZC4 300 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MYOTQ9UBF9 498 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 FBXL17Q9UF56 701 aa9.1□□□□□ -0.95
PDLIM1-205ENST00000493949 MALRD1Q5VYJ5 2156 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 C7orf77A4D0Y5 90 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 LIPT2A6NK58 231 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 B4DEV8 164 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 GMFGO60234 142 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 NDUFS6O75380 124 aaKnown RBP9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 HCKP08631 526 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 MMP9P14780 707 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 LOXP28300 417 aaPredicted RBP9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 NPY4RP50391 375 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 S100A10P60903 97 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 RAB2AP61019 212 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SSTP61278 116 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC35A1P78382 337 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SRSF3P84103 164 aaKnown RBP9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 HGFACQ04756 655 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 CLINT1Q14677 625 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC9A3R2Q15599 337 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 OR8B8Q15620 311 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 CLEC12BQ2HXU8 276 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 AWAT1Q58HT5 328 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 PLAC9Q5JTB6 97 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 PLXDC2Q6UX71 529 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 MARCH3Q86UD3 253 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 C9orf40Q8IXQ3 194 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 CCDC71LQ8N9Z2 235 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 OR6X1Q8NH79 312 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 TMEM171Q8WVE6 324 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 GAL3ST4Q96RP7 486 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SPIN2AQ99865 258 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SPIN2BQ9BPZ2 258 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SYT3Q9BQG1 590 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 ANGPTL4Q9BY76 406 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 OR2S2Q9NQN1 319 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 CENPMQ9NSP4 180 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF391Q9UJN7 358 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 AMDHD2Q9Y303 409 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 FAM96BQ9Y3D0 163 aa9.09□□□□□ -0.95
PDLIM1-205ENST00000493949 TRRAPQ9Y4A5 3859 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 LOC100509620A0A075B734 347 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 A0A0A6YYD4 124 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 SIGLEC5O15389 551 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 ADAP1O75689 374 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 HTR3BO95264 441 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 CDS2O95674 445 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 IGHV2-70P01814 119 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 SERPINA5P05154 406 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 ATP5J2P56134 94 aa9.08□□□□□ -0.96
PDLIM1-205ENST00000493949 TMEM33P57088 247 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms