RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 Q6ZRG5 221 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 Q6ZTK2 550 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CMTM1Q8IZ96 169 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR52N4Q8NGI2 321 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 MBD3L2Q8NHZ7 208 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM54Q969K7 222 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 DERL3Q96Q80 235 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 OR2V2Q96R30 315 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 CCL19Q99731 98 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 HINT2Q9BX68 163 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 KCNK15Q9H427 330 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 SH2D2AQ9NP31 389 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.87□□□□□ -1.795e-8■■■□□ 15.5
TRA2B-215ENST00000492417 SLC39A9Q9NUM3 307 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 FOXD3Q9UJU5 478 aaPredicted RBP3.87□□□□□ -1.79
TRA2B-215ENST00000492417 ST3GAL6Q9Y274 331 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 LRP4O75096 1905 aa3.87□□□□□ -1.79
TRA2B-215ENST00000492417 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM238LA0A1B0GVL6 79 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 J3QR89 54 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 KLF4O43474 513 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 LY6HO94772 140 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 PLAUP00749 431 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 SMIM6P0DI80 62 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 CD37P11049 281 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 RPL29P47914 159 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 RAB11AP62491 216 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TESK1Q15569 626 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 LINC01559Q495D7 138 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 HIST2H2BCQ6DN03 193 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 RTL6Q6ICC9 239 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 DEGS2Q6QHC5 323 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 KDF1Q8NAX2 398 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 OR4C5Q8NGB2 326 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 OR4K15Q8NH41 348 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 KCNG3Q8TAE7 436 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM45BQ96B21 275 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 UPRTQ96BW1 309 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ANAPC16Q96DE5 110 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 LINC00052Q96N35 136 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 BARHL1Q9BZE3 327 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 PLSCR4Q9NRQ2 329 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 FRYLO94915 3013 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TRAV39A0A0B4J263 110 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 IGHV2OR16-5A0A0B4J2B6 119 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 SNRPGP15A8MWD9 76 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 GATCO43716 136 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 IL18BPO95998 194 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TTRP02766 147 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 FABP4P15090 132 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ATF1P18846 271 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 HNF1AP20823 631 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 PSMB6P28072 239 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 NTF4P34130 210 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 SNCAP37840 140 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 GPR6P46095 362 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF266Q14584 549 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 KISS1Q15726 138 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM95Q3KNT9 176 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 PHYHIPQ92561 330 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 RAB1CQ92928 201 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 CABLES2Q9BTV7 478 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 LINC00470Q9BZP3 86 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 GP6Q9HCN6 339 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 NDUFB11Q9NX14 153 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 V9GYS6 101 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ABCA12Q86UK0 2595 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TP53BP1Q12888 1972 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 SPEGQ15772 3267 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ZFP92A6NM28 416 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 CYB5BO43169 146 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ENSAO43768 121 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 JTBO76095 146 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 MT-CO2P00403 227 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 H2AFB1P0C5Y9 115 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 PRF1P14222 555 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 RPA2P15927 270 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 HNRNPA3P51991 378 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 FUT6P51993 359 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF362Q5T0B9 420 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 CLEC2AQ6UVW9 174 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 UQCC3Q6UW78 93 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 TPRX1Q8N7U7 411 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 GCDHQ92947 438 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ADAT3Q96EY9 351 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 MRPL13Q9BYD1 178 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 HRASLSQ9HDD0 168 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF275Q9NSD4 429 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 EXOGQ9Y2C4 368 aaKnown RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 MMP24Q9Y5R2 645 aa3.86□□□□□ -1.79
TRA2B-215ENST00000492417 SIRT4Q9Y6E7 314 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-215ENST00000492417 MDFIC2A0A1B0GVS7 189 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 OR4C45A6NMZ5 311 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 CEBPZOSA8MTT3 80 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 SH2D1BO14796 132 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 NDUFB3O43676 98 aa3.85□□□□□ -1.79
TRA2B-215ENST00000492417 CYB5R3P00387 301 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms