RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NAPSAO96009 420 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF806P0C7X5 589 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 CD46P15529 392 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 ECI1P42126 302 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 DPPA2Q7Z7J5 298 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 CCDC36Q8IYA8 594 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 ZFP62Q8NB50 900 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-220ENST00000492280 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 ANKRD30BLA7E2S9 258 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 CST7O76096 145 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 TK1P04183 234 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 PJVKQ0ZLH3 352 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 LGI3Q8N145 548 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF565Q8N9K5 539 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 FDCSPQ8NFU4 85 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 MMP26Q9NRE1 261 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
HMGN1-220ENST00000492280 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 A0A0G2JRQ6 117 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 PROB1E7EW31 1015 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 H7C1Q1 480 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 LINC01387J3KSC0 135 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 SS18L1O75177 396 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-220ENST00000492280 CST4P01036 141 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 SFTA3P0C7M3 94 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 FBXW9Q5XUX1 488 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 LILRB1Q8NHL6 650 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-220ENST00000492280 MRPL30Q8TCC3 161 aaKnown RBP10.6□□□□□ -0.71
HMGN1-220ENST00000492280 FER1L6-AS2Q96M78 137 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 TRIB1Q96RU8 372 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 NRIP2Q9BQI9 281 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 ABHD14AQ9BUJ0 271 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 SUCNR1Q9BXA5 334 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 OR14J1Q9UGF5 321 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 CDIPTO14735 213 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 GRPP07492 148 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 PPT1P50897 306 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 RNPS1Q15287 305 aaKnown RBP10.6□□□□□ -0.71
HMGN1-220ENST00000492280 MIDNQ504T8 468 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM182Q6ZP80 229 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 POLEQ07864 2286 aa10.6□□□□□ -0.71
HMGN1-220ENST00000492280 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 E5RGE8 158 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 ARR3P36575 388 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 PLA2G5P39877 138 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 NRN1LQ496H8 165 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 FAM58AQ8N1B3 248 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 BCL2L2Q92843 193 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-220ENST00000492280 AKR1E2Q96JD6 320 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 NSG2Q9Y328 171 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 CDRT15L2A8MXV6 281 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM50AO95807 157 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 GLAP06280 429 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 IGHV1-2P23083 117 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 SULT1A2P50226 295 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 RUNX1Q01196 453 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 RCC2Q9P258 522 aaKnown RBP10.59□□□□□ -0.71
HMGN1-220ENST00000492280 FBXO9Q9UK97 447 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF175Q9Y473 711 aa10.59□□□□□ -0.71
HMGN1-220ENST00000492280 WNT9BO14905 357 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 EIF3GO75821 320 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMGN1-220ENST00000492280 PRH1P02810 166 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF16P17020 682 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-220ENST00000492280 HNF4GQ14541 408 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 PCSK4Q6UW60 755 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 CCDC71LQ8N9Z2 235 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM171Q8WVE6 324 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 TECTBQ96PL2 329 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 PARD6AQ9NPB6 346 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 DLL3Q9NYJ7 618 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 ERRFI1Q9UJM3 462 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-220ENST00000492280 SLC34A2O95436 690 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
HMGN1-220ENST00000492280 MPV17P39210 176 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 KCNJ3P48549 501 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 GNG3P63215 75 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
HMGN1-220ENST00000492280 SVBPQ8N300 66 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 OR5A2Q8NGI9 324 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 PCDHB16Q9NRJ7 776 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 LUZP4Q9P127 313 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 TINAGQ9UJW2 476 aa10.58□□□□□ -0.72
HMGN1-220ENST00000492280 TRDCB7Z8K6 153 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms