RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CRHBPP24387 322 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 NFYBP25208 207 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 HTR1DP28221 377 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 CD34P28906 385 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 KCNJ3P48549 501 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 PAX5Q02548 391 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 MPV17LQ2QL34 196 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 LINC00596Q86U02 117 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 RTN4RL2Q86UN3 420 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 THRSPQ92748 146 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 CNBD2Q96M20 576 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 NCOR1P1Q9H4R4 102 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 MGAM2Q2M2H8 2515 aa19.88■□□□□ 0.77
UPF3A-209ENST00000492270 A6NDX4 124 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 ATP6V1G2O95670 118 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 GABRA5P31644 462 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 SSTR5P35346 364 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 LIPKQ5VXJ0 399 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 LIAT1Q6ZQX7 453 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 CDH26Q8IXH8 852 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 MS4A15Q8N5U1 240 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 NKAIN3Q8N8D7 197 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 OR4C13Q8NGP0 309 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 ZNF596Q8TC21 504 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 CYYR1Q96J86 154 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 BANF2Q9H503 90 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 RAB18Q9NP72 206 aa19.87■□□□□ 0.77
UPF3A-209ENST00000492270 A0A087X0M5 115 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 A0A1B0GX30 115 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 IL1AP01583 271 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 IGHV3-7P01780 117 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 HSPA13P48723 471 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 DYNLT3P51808 116 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 GPR176Q14439 515 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 LTC4SQ16873 150 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 HLA-DRB5Q30154 266 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 ZNF565Q8N9K5 539 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 TMEM104Q8NE00 496 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 RFESDQ8TAC1 157 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 LEAP2Q969E1 77 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 CCDC90BQ9GZT6 254 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 PCDHB16Q9NRJ7 776 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 IDI2-AS1Q9NZ38 188 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 DPM3Q9P2X0 92 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 FBLN5Q9UBX5 448 aa19.86■□□□□ 0.77
UPF3A-209ENST00000492270 TET2Q6N021 2002 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-209ENST00000492270 F2RL2O00254 374 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 SC5DO75845 299 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 HSMCR30P0CW71 290 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 VHLP40337 213 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 MAP2K4P45985 399 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 RBM48Q5RL73 367 aaKnown RBP19.85■□□□□ 0.77
UPF3A-209ENST00000492270 LRRTM1Q86UE6 522 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 NEK7Q8TDX7 302 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 UFD1Q92890 307 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 TCF7L1Q9HCS4 588 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 CMYA5Q8N3K9 4069 aa19.85■□□□□ 0.77
UPF3A-209ENST00000492270 VWFP04275 2813 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 TOR1AO14656 332 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 CRTAPO75718 401 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-209ENST00000492270 MGMTP16455 207 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 KIR2DS4P43632 304 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 EFNB2P52799 333 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 RPS25P62851 125 aaKnown RBP19.84■□□□□ 0.77
UPF3A-209ENST00000492270 RBM39Q14498 530 aaKnown RBP19.84■□□□□ 0.77
UPF3A-209ENST00000492270 FBLN7Q53RD9 439 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 CEACAM19Q7Z692 300 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 TMEM203Q969S6 136 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 SELENOIQ9C0D9 397 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 NPFFR1Q9GZQ6 430 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 RANBP3Q9H6Z4 567 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-209ENST00000492270 LINC00574Q9H8X3 128 aa19.84■□□□□ 0.77
UPF3A-209ENST00000492270 RCC2Q9P258 522 aaKnown RBP19.84■□□□□ 0.77
UPF3A-209ENST00000492270 TMEM30CPA0ZSE6 113 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 NPIPB11E5RHQ5 1161 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 BUB1B-PAK6H3BSN5 160 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 CD24P25063 80 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 GPR50Q13585 617 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 PRSS48Q7RTY5 328 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 UBALD1Q8TB05 177 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 CCDC107Q8WV48 283 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 FAM46BQ96A09 425 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 MRPS24Q96EL2 167 aaKnown RBP19.83■□□□□ 0.77
UPF3A-209ENST00000492270 UQCC2Q9BRT2 126 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 ZNF702PQ9H963 129 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 PITPNC1Q9UKF7 332 aa19.83■□□□□ 0.77
UPF3A-209ENST00000492270 LEUTXA8MZ59 168 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 PRRX1P54821 245 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 TPBGQ13641 420 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 HABP2Q14520 560 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-209ENST00000492270 HSD17B12Q53GQ0 312 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 HIST2H2BDQ6DRA6 164 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 OR9G1Q8NH87 305 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 Q96M66 194 aa19.82■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A22PA8MWA6 464 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 LY6LH3BQJ8 138 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 UCHL1P09936 223 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 GNG10P50151 68 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 TPTE2P1Q5T6R2 138 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 RAB12Q6IQ22 244 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms