RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C15orf65H3BRN8 121 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 FGF16O43320 207 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 PEX14O75381 377 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 LALBAP00709 142 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 PRB2P02812 416 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 LPLP06858 475 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 OCM2P0CE71 109 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 OCMP0CE72 109 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 MNDAP41218 407 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 OR3A4PP47883 348 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 RBM11P57052 281 aaKnown RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 EGFEM1PQ0D2K5 195 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF816Q0VGE8 651 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 MADCAM1Q13477 382 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 PIGYQ3MUY2 71 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 Q3ZCU0 254 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 PAN3Q58A45 887 aaKnown RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 OR2G6Q5TZ20 316 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 C10orf99Q6UWK7 81 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 LINC00596Q86U02 117 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 OR8H3Q8N146 312 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 LINC00311Q8N616 119 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 Q8N6K4 173 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 C5orf56Q8N8D9 126 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 SUMF2Q8NBJ7 301 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 TNFAIP8L1Q8WVP5 186 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 MYDGFQ969H8 173 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 ST6GALNAC6Q969X2 333 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM106AQ96A25 262 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 SMIM19Q96E16 107 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 DPCDQ9BVM2 203 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 SMPD3Q9NY59 655 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 TAS2R4Q9NYW5 299 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 AMMECR1Q9Y4X0 333 aaPredicted RBP6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TRBV5-7A0A0A0MS05 114 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TCRBV4S1A1TA0A5B7 111 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 IRGMA1A4Y4 181 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MAGEB3O15480 346 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 ORC5O43913 435 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 CDRT1O95170 752 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MT-ND4P03905 459 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 CD1AP06126 327 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 CD2P06729 351 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 FSTP19883 344 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 SSTR5P35346 364 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 SOX2P48431 317 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 RAB7AP51149 207 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 ADARB1P78563 741 aaKnown RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 RSU1Q15404 277 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 ZSCAN26Q16670 478 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MPV17LQ2QL34 196 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 FOXB2Q5VYV0 432 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 LAIR2Q6ISS4 152 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TMPRSS11AQ6ZMR5 421 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 CDH26Q8IXH8 852 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 DRAM1Q8N682 238 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM104Q8NE00 496 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 OR10K1Q8NGX5 313 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 OR52N1Q8NH53 320 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 OR56B4Q8NH76 319 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 FBLIM1Q8WUP2 373 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TSEN15Q8WW01 171 aaKnown RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 GHSRQ92847 366 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 RPEQ96AT9 228 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MRPS24Q96EL2 167 aaKnown RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 PGLYRP3Q96LB9 341 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 NR1H4Q96RI1 486 aaPredicted RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 METTL9Q9H1A3 318 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 C8orf4Q9NR00 106 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 PLSCR3Q9NRY6 295 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 PAK1IP1Q9NWT1 392 aaPredicted RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 RCC2Q9P258 522 aaKnown RBP6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 CLEC2DQ9UHP7 191 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 ST3GAL6Q9Y274 331 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 MOB4Q9Y3A3 225 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 HSPE1-MOB4S4R3N1 261 aa6.63□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM30CPA0ZSE6 113 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ERICH4A6NGS2 130 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 CCRL2O00421 344 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 HSPB6O14558 160 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 GEMIN2O14893 280 aaKnown RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 PIN1P1O15428 100 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF780AO75290 641 aaPredicted RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 HTR3BO95264 441 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 DUS4LO95620 317 aaKnown RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 IGHG2P01859 326 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 SNRNP70P08621 437 aaKnown RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 CD37P11049 281 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 IGLL1P15814 213 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 NFYBP25208 207 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 BDKRB2P30411 391 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 SLC6A1P30531 599 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF93P35789 620 aaPredicted RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 GLP1RP43220 463 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF137PP52743 207 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 YIF1BQ5BJH7 314 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms