RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 DDI2Q5TDH0 399 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 RSBN1Q5VWQ0 802 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 ASCL4Q6XD76 172 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OSR2Q8N2R0 312 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 PACRGLQ8N7B6 248 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 Q8NFD4 153 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR4F17Q8NGA8 305 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR13C5Q8NGS8 318 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR52N1Q8NH53 320 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR9G1Q8NH87 305 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 PLPPR1Q8TBJ4 325 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 MRGPRDQ8TDS7 321 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 GHSRQ92847 366 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 LEAP2Q969E1 77 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 TOMM40LQ969M1 308 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 RPEQ96AT9 228 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 R3HDM4Q96D70 268 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 TMEM80Q96HE8 168 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 OR4F4Q96R69 305 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 S100A13Q99584 98 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 OCSTAMPQ9BR26 566 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 SLC25A33Q9BSK2 321 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 DPCDQ9BVM2 203 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 MMP28Q9H239 520 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 NCOR1P1Q9H4R4 102 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 C8orf4Q9NR00 106 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 PCDHB16Q9NRJ7 776 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 PAK1IP1Q9NWT1 392 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 IDI2-AS1Q9NZ38 188 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 IL36GQ9NZH8 169 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 CKLFQ9UBR5 152 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 CLEC2DQ9UHP7 191 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 ST3GAL6Q9Y274 331 aa6.61□□□□□ -1.35
LSM2-213ENST00000491421 AMMECR1Q9Y4X0 333 aaPredicted RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
LSM2-213ENST00000491421 TRAV39A0A0B4J263 110 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 TRBV5-5A0A0J9YX44 114 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 A0A1W2PRX2 142 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 EFCAB10A6NFE3 127 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 J3QR06 171 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 M0QZK8 103 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 XPNPEP2O43895 674 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 LALBAP00709 142 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 IGHV3-7P01780 117 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 LPLP06858 475 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 FAM106CPP0CH98 169 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 SERPINA2P20848 420 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 SSTR5P35346 364 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 GNG10P50151 68 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 RBM11P57052 281 aaKnown RBP6.6□□□□□ -1.35
LSM2-213ENST00000491421 PAX5Q02548 391 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 RCN1Q15293 331 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 ABCA11PQ4W5N1 156 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 FBLN7Q53RD9 439 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 NHLRC3Q5JS37 347 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 SAMD5Q5TGI4 173 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 DMKNQ6E0U4 476 aaPredicted RBP6.6□□□□□ -1.35
LSM2-213ENST00000491421 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
LSM2-213ENST00000491421 LINC00596Q86U02 117 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 DHRSXQ8N5I4 330 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 ZFP41Q8N8Y5 198 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 SUMF2Q8NBJ7 301 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 OR5AU1Q8NGC0 362 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 RFESDQ8TAC1 157 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 ZNF184Q99676 751 aaPredicted RBP6.6□□□□□ -1.35
LSM2-213ENST00000491421 IFT22Q9H7X7 185 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 LINC00574Q9H8X3 128 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 ZNF581Q9P0T4 197 aa6.6□□□□□ -1.35
LSM2-213ENST00000491421 TET2Q6N021 2002 aaPredicted RBP6.6□□□□□ -1.35
LSM2-213ENST00000491421 TRAV8-7A0A075B6U6 113 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 TMEM30CPA0ZSE6 113 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 MAGEA13PA6NCF6 341 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 ADARB2-AS1A8MUL3 147 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 NPIPB11E5RHQ5 1161 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 GEMIN2O14893 280 aaKnown RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 ZNF780AO75290 641 aaPredicted RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 GTF2F2P13984 249 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 IGFBP3P17936 291 aaPredicted RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 FSTP19883 344 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 TAS2R43P59537 309 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 ADARB1P78563 741 aaKnown RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 ST3GAL4Q11206 333 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 MADCAM1Q13477 382 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 MPV17LQ2QL34 196 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 Q499Y3 187 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 SLC22A6Q4U2R8 563 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 YIF1BQ5BJH7 314 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 C9orf152Q5JTZ5 239 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 ATAD3CQ5T2N8 411 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 KPRPQ5T749 579 aaPredicted RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 MZT2AQ6P582 158 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 SLC16A12Q6ZSM3 486 aa6.59□□□□□ -1.35
LSM2-213ENST00000491421 C8orf59Q8N0T1 100 aaPredicted RBP6.59□□□□□ -1.35
LSM2-213ENST00000491421 JAGN1Q8N5M9 183 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms