RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 CD2P06729 351 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 C21orf33P30042 268 aaPredicted RBP10.84□□□□□ -0.67
COL6A3-211ENST00000491233 KCNJ3P48549 501 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 KLHL22Q53GT1 634 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 OSR2Q8N2R0 312 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 DRAM1Q8N682 238 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 RFESDQ8TAC1 157 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 S100A14Q9HCY8 104 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 FGF20Q9NP95 211 aaPredicted RBP10.84□□□□□ -0.67
COL6A3-211ENST00000491233 FAM118AQ9NWS6 357 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 ZNF581Q9P0T4 197 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 PSG11Q9UQ72 335 aa10.84□□□□□ -0.67
COL6A3-211ENST00000491233 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A18PA6NE21 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A16PA6NEW6 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A20PA6NIJ5 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A9PA6NNJ1 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A12PA8MX19 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A5PA8MXJ8 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 NPIPB11E5RHQ5 1161 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 WBP4O75554 376 aaKnown RBP10.83□□□□□ -0.68
COL6A3-211ENST00000491233 CDRT1O95170 752 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A15PP0C7V4 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A13PP0C7W8 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A14PP0C7W9 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 FAM90A24PP0C7X0 464 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 TMEM11P17152 192 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 SLC35A2P78381 396 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 PAX5Q02548 391 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 MADCAM1Q13477 382 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 DIAPH2-AS1Q14236 149 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 HES1Q14469 280 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 SMN1Q16637 294 aaKnown RBP10.83□□□□□ -0.68
COL6A3-211ENST00000491233 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 OR2G6Q5TZ20 316 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
COL6A3-211ENST00000491233 ASCL4Q6XD76 172 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 C10orf67Q8IYJ2 551 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 SUMF2Q8NBJ7 301 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 Q8NFD4 153 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 TMEM106AQ96A25 262 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 DPCDQ9BVM2 203 aaPredicted RBP10.83□□□□□ -0.68
COL6A3-211ENST00000491233 LINC00574Q9H8X3 128 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 ST3GAL6Q9Y274 331 aa10.83□□□□□ -0.68
COL6A3-211ENST00000491233 A0A1W2PPE3 182 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 OR7C1O76099 320 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-211ENST00000491233 CLIC3O95833 236 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 MPIG6BO95866 241 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 SERPINA2P20848 420 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-211ENST00000491233 ETV1P50549 477 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 RAB7AP51149 207 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 RBM11P57052 281 aaKnown RBP10.82□□□□□ -0.68
COL6A3-211ENST00000491233 PPP3R1P63098 170 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 CCDC58Q4VC31 144 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 THNSL2Q86YJ6 484 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 OR8H3Q8N146 312 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 ZNF555Q8NEP9 628 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 OR10A7Q8NGE5 316 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 OR13C5Q8NGS8 318 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 ORAI1Q96D31 301 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 TMEM138Q9NPI0 162 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 IL36GQ9NZH8 169 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 ING4Q9UNL4 249 aa10.82□□□□□ -0.68
COL6A3-211ENST00000491233 SIRT4Q9Y6E7 314 aaPredicted RBP10.82□□□□□ -0.68
COL6A3-211ENST00000491233 TMEM30CPA0ZSE6 113 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 HSD17B6O14756 317 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
COL6A3-211ENST00000491233 IGKV1D-33P01593 117 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 IGKV1-33P01594 117 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 CSTBP04080 98 aaKnown RBP10.81□□□□□ -0.68
COL6A3-211ENST00000491233 BDKRB2P30411 391 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 HNF4GQ14541 408 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 NHLRC3Q5JS37 347 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 TMPRSS11AQ6ZMR5 421 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 ZNF329Q86UD4 541 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 OR10X1Q8NGY0 326 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 UBALD1Q8TB05 177 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 SMIM19Q96E16 107 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 RCC1LQ96I51 464 aaKnown RBP10.81□□□□□ -0.68
COL6A3-211ENST00000491233 METTL9Q9H1A3 318 aa10.81□□□□□ -0.68
COL6A3-211ENST00000491233 SMPD3Q9NY59 655 aaPredicted RBP10.81□□□□□ -0.68
COL6A3-211ENST00000491233 A0A1W2PP11 408 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 K7EIL1 84 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 FGF16O43320 207 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 BAG2O95816 211 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 LALBAP00709 142 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 DCKP27707 260 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 REG1BP48304 166 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 MPV17LQ2QL34 196 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 ATAD3CQ5T2N8 411 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 ETV3LQ6ZN32 361 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 SLC16A12Q6ZSM3 486 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 LINC00596Q86U02 117 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 LINC00482Q8N8I6 264 aa10.8□□□□□ -0.68
COL6A3-211ENST00000491233 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms