RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CEACAM3P40198 252 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 VDAC2P45880 294 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-219ENST00000491183 DOC2BQ14184 412 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 RBM39Q14498 530 aaKnown RBP14.38□□□□□ -0.11
HMGN1-219ENST00000491183 OSR2Q8N2R0 312 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 RFESDQ8TAC1 157 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 MRGPRDQ8TDS7 321 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 CREB3L1Q96BA8 519 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 DPCDQ9BVM2 203 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-219ENST00000491183 IFT22Q9H7X7 185 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 CHCHD3Q9NX63 227 aaKnown RBP14.38□□□□□ -0.11
HMGN1-219ENST00000491183 IDI2-AS1Q9NZ38 188 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 HSPE1-MOB4S4R3N1 261 aa14.38□□□□□ -0.11
HMGN1-219ENST00000491183 A0A1W2PP11 408 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 G3V4G9 280 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 H3BUI4 141 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 J3QR06 171 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 GEMIN2O14893 280 aaKnown RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 IL1AP01583 271 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 CAPGP40121 348 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 KCNJ3P48549 501 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 RBM11P57052 281 aaKnown RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 EMX1Q04741 257 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 MED21Q13503 144 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 RIPK1Q13546 671 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 LTC4SQ16873 150 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 Q499Y3 187 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 YIF1BQ5BJH7 314 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 ARSJQ5FYB0 599 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 FBLIM1Q8WUP2 373 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 RBM14Q96PK6 669 aaKnown RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 ZNF184Q99676 751 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-219ENST00000491183 SLC25A33Q9BSK2 321 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 MMP28Q9H239 520 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 PSORS1C1Q9UIG5 152 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 PSG11Q9UQ72 335 aa14.37□□□□□ -0.11
HMGN1-219ENST00000491183 TRBV5-7A0A0A0MS05 114 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 A0A1W2PPK0 400 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 OOSP1A8MZH6 123 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 PEX14O75381 377 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 OR7C1O76099 320 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-219ENST00000491183 OR2F2O95006 317 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 CSTBP04080 98 aaKnown RBP14.36□□□□□ -0.11
HMGN1-219ENST00000491183 SERPINA2P20848 420 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 SSTR5P35346 364 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 ARHGDIBP52566 201 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 DIAPH2-AS1Q14236 149 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 ABCA11PQ4W5N1 156 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 OGFRL1Q5TC84 451 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-219ENST00000491183 PLCXD1Q9NUJ7 323 aa14.36□□□□□ -0.11
HMGN1-219ENST00000491183 CNOT2Q9NZN8 540 aaKnown RBP14.36□□□□□ -0.11
HMGN1-219ENST00000491183 PNMA8CA0A1B0GUJ8 204 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A18PA6NE21 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A16PA6NEW6 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 EFCAB10A6NFE3 127 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A20PA6NIJ5 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 SH2D7A6NKC9 451 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A9PA6NNJ1 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A12PA8MX19 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A5PA8MXJ8 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 CASQ2O14958 399 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A15PP0C7V4 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A13PP0C7W8 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A14PP0C7W9 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 FAM90A24PP0C7X0 464 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 MNDAP41218 407 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 CD83Q01151 205 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 BEAN1Q3B7T3 259 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 SLC22A6Q4U2R8 563 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 SAMD5Q5TGI4 173 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 CCDC144NLQ6NUI1 221 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 C8orf59Q8N0T1 100 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-219ENST00000491183 OR5AU1Q8NGC0 362 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 OR10A7Q8NGE5 316 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 AKR1E2Q96JD6 320 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 OR14A2Q96R54 314 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 S100A13Q99584 98 aa14.35□□□□□ -0.11
HMGN1-219ENST00000491183 PAK1IP1Q9NWT1 392 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-219ENST00000491183 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 PIN1P1O15428 100 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 LPLP06858 475 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 FSTP19883 344 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 GZMHP20718 246 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 MPV17LQ2QL34 196 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 TCTEX1D4Q5JR98 221 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 SLC16A12Q6ZSM3 486 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 AHSA2Q719I0 299 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 LINC00596Q86U02 117 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 LYPD6Q86Y78 171 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 THNSL2Q86YJ6 484 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 TOMM40LQ969M1 308 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 MUL1Q969V5 352 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 RPEQ96AT9 228 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 R3HDM4Q96D70 268 aa14.34□□□□□ -0.11
HMGN1-219ENST00000491183 AMMECR1Q9Y4X0 333 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-219ENST00000491183 TGP01266 2768 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 A0A1W2PPE3 182 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms