RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 OR13A1Q8NGR1 328 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 OR9G1Q8NH87 305 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 MRGPRDQ8TDS7 321 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 KIRREL1Q96J84 757 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 IFT22Q9H7X7 185 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 SPACA1Q9HBV2 294 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 IDI2-AS1Q9NZ38 188 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 MRPS28Q9Y2Q9 187 aaKnown RBP14.05□□□□□ -0.16
SEC13-218ENST00000490283 DSCAML1Q8TD84 2053 aa14.05□□□□□ -0.16
SEC13-218ENST00000490283 TRAV8-7A0A075B6U6 113 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 A0A087X0M5 115 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 TRBV5-7A0A0A0MS05 114 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 A0A1B0GX30 115 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 TMEM30CPA0ZSE6 113 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 PTGES3LE9PB15 166 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 BUB1B-PAK6H3BSN5 160 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 GEMIN2O14893 280 aaKnown RBP14.04□□□□□ -0.16
SEC13-218ENST00000490283 IGLV1-47P01700 117 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 MAS1P04201 325 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 CDK1P06493 297 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 CSF1P09603 554 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 GDNFP39905 211 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 DOC2BQ14184 412 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 AWAT2Q6E213 333 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 C16orf82Q7Z2V1 217 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 CDH26Q8IXH8 852 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 NKAIN3Q8N8D7 197 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 OR10A7Q8NGE5 316 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 PLPPR1Q8TBJ4 325 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 MUL1Q969V5 352 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 MRPS24Q96EL2 167 aaKnown RBP14.04□□□□□ -0.16
SEC13-218ENST00000490283 DERL3Q96Q80 235 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 MMP28Q9H239 520 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 VCX3BQ9H321 246 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 ZNF702PQ9H963 129 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 FKBP14Q9NWM8 211 aa14.04□□□□□ -0.16
SEC13-218ENST00000490283 MEGF11A6BM72 1044 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 OOSP1A8MZH6 123 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 JUNBP17275 347 aaPredicted RBP14.03□□□□□ -0.16
SEC13-218ENST00000490283 LTC4SQ16873 150 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 C6orf141Q5SZD1 244 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 TPTE2P1Q5T6R2 138 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 GLIPR1L1Q6UWM5 242 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 Q8N2B8 174 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 MS4A15Q8N5U1 240 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 RPEQ96AT9 228 aa14.03□□□□□ -0.16
SEC13-218ENST00000490283 NKX1-2Q9UD57 310 aaPredicted RBP14.03□□□□□ -0.16
SEC13-218ENST00000490283 MAGEA13PA6NCF6 341 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A22PA8MWA6 464 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 GZMHP20718 246 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 VDAC2P45880 294 aaPredicted RBP14.02□□□□□ -0.17
SEC13-218ENST00000490283 AQP4P55087 323 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.17
SEC13-218ENST00000490283 RNLSQ5VYX0 342 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 C11orf44Q8N8P7 122 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 RFESDQ8TAC1 157 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 TOMM40LQ969M1 308 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 LIN7BQ9HAP6 207 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 RAB9BQ9NP90 201 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 TPRKBQ9Y3C4 175 aa14.02□□□□□ -0.17
SEC13-218ENST00000490283 MCRIP1C9JLW8 97 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 J3QR06 171 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 TSPAN15O95858 294 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 CGB3P0DN86 165 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 CGB7P0DN87 165 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 SSTR5P35346 364 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 HABP2Q14520 560 aaPredicted RBP14.01□□□□□ -0.17
SEC13-218ENST00000490283 MED22Q15528 200 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 SLC16A12Q6ZSM3 486 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 FAM110DQ8TAY7 271 aaPredicted RBP14.01□□□□□ -0.17
SEC13-218ENST00000490283 UQCC2Q9BRT2 126 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 LINC00574Q9H8X3 128 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 TRRAPQ9Y4A5 3859 aa14.01□□□□□ -0.17
SEC13-218ENST00000490283 A0A1W2PP11 408 aa14□□□□□ -0.17
SEC13-218ENST00000490283 NPIPB11E5RHQ5 1161 aa14□□□□□ -0.17
SEC13-218ENST00000490283 AIPO00170 330 aa14□□□□□ -0.17
SEC13-218ENST00000490283 FBXO24O75426 580 aa14□□□□□ -0.17
SEC13-218ENST00000490283 CRTAPO75718 401 aaPredicted RBP14□□□□□ -0.17
SEC13-218ENST00000490283 FAM106CPP0CH98 169 aa14□□□□□ -0.17
SEC13-218ENST00000490283 GNG10P50151 68 aa14□□□□□ -0.17
SEC13-218ENST00000490283 MADCAM1Q13477 382 aa14□□□□□ -0.17
SEC13-218ENST00000490283 SPHARQ15513 63 aa14□□□□□ -0.17
SEC13-218ENST00000490283 ACSM3Q53FZ2 586 aa14□□□□□ -0.17
SEC13-218ENST00000490283 OR10X1Q8NGY0 326 aa14□□□□□ -0.17
SEC13-218ENST00000490283 CFHR4Q92496 578 aa14□□□□□ -0.17
SEC13-218ENST00000490283 ARL11Q969Q4 196 aa14□□□□□ -0.17
SEC13-218ENST00000490283 SLC25A33Q9BSK2 321 aa14□□□□□ -0.17
SEC13-218ENST00000490283 TMED9Q9BVK6 235 aa14□□□□□ -0.17
SEC13-218ENST00000490283 SELENOIQ9C0D9 397 aa14□□□□□ -0.17
SEC13-218ENST00000490283 SERTAD4Q9NUC0 356 aa14□□□□□ -0.17
SEC13-218ENST00000490283 ZNF581Q9P0T4 197 aa14□□□□□ -0.17
SEC13-218ENST00000490283 GHRLQ9UBU3 117 aa14□□□□□ -0.17
SEC13-218ENST00000490283 TRAV39A0A0B4J263 110 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A10PA6NDY2 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A18PA6NE21 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A16PA6NEW6 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A20PA6NIJ5 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A7PA6NKC0 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A12PA8MX19 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A5PA8MXJ8 464 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms